Geomonas oryzisoli: KP004_01230
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Entry
KP004_01230 CDS
T07282
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ger
Geomonas oryzisoli
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ger03016
]
KP004_01230
Enzymes [BR:
ger01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
KP004_01230
Transfer RNA biogenesis [BR:
ger03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KP004_01230
Prokaryotic type
KP004_01230
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QWV93846
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All DBs
Position
268385..269461
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AA seq
358 aa
AA seq
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MPKPFRYLEPTFFAGLFDDPLLLVRVRPTGRALLFDCGKMHHLAKRVYTSIDAIFISHAH
MDHFMGMDSVIRHSHASPRTIDVFGPPGLSKRMASKFACYDWNLADTFWGNFRVNEVGAN
GRVASTLYSGPEAFLASSEGERNGVLYGNRHLTVSGTQCEHHIPVMAYRIDEGAAFVLDD
ERMAAEGVRKGEWLKDMEKLFHDGMEGRAVRYLHERGGRVEEAVAQDAAALYQRIRTFEQ
PASIGYVTDIGYSEENVAKLAGLVQGVTLLVCECAFLASEKAKAGLSRHLCTTQFNELLD
RLRPRYVLPMHFSKTYQRGSETLYQEIEPPSGVTVLKIPDRLTPRPIMESEVPRPIEM
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacctttccgctacctcgaacctaccttcttcgcaggactgttcgacgacccg
ctgcttttagtccgggtccgtcccaccggtcgcgcccttcttttcgattgcggcaagatg
catcacctcgccaagagggtctacacctccatcgacgccatcttcatcagccacgcccac
atggaccatttcatggggatggacagcgtcatccgccacagccacgcctcgccgcgcact
atcgacgtctttggtcctccgggactgtccaagcgcatggccagcaagttcgcgtgctat
gactggaaccttgccgataccttctgggggaatttcagggtcaacgaggtgggcgcgaac
ggccgggtcgcgagcacgctctacagcggcccggaggcgttcctcgccagttccgaaggg
gagagaaacggcgtcctttacggcaaccgccacctcaccgtgagcgggacccagtgtgaa
catcacattccggtgatggcctatcgcatcgacgagggggccgccttcgtgcttgacgac
gagcgcatggcggcggaaggagtacggaagggtgagtggctcaaggacatggagaagctg
ttccatgacgggatggaggggagggcggtcaggtatctgcatgagcgcggcgggcgtgtc
gaagaggcggttgcgcaggatgccgcggcgttgtaccagcgcatcaggacgttcgaacag
ccggcgagcatcgggtacgtgaccgatatcgggtattccgaggagaacgttgccaagctc
gcggggttggtgcagggggtgaccctgttggtatgcgagtgtgccttcctggcgtccgag
aaggctaaggccgggttgtcgcgccatctctgcacgacccagttcaacgagctcctggac
cggttgcgcccgagatacgtgctgccgatgcatttctccaagacctaccagagggggagc
gagaccttgtaccaggagatcgagcccccgtccggggtcacggttctcaagatccccgac
cggctcaccccgcgccccatcatggaaagcgaggtgccgcggccgattgagatgtga
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