KEGG   Geomonas oryzisoli: KP004_01680
Entry
KP004_01680       CDS       T07282                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
ger  Geomonas oryzisoli
Pathway
ger00470  D-Amino acid metabolism
ger00550  Peptidoglycan biosynthesis
ger01100  Metabolic pathways
ger01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:ger00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    KP004_01680
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    KP004_01680
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    KP004_01680
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ger01011]
    KP004_01680
Enzymes [BR:ger01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     KP004_01680
Peptidoglycan biosynthesis and degradation proteins [BR:ger01011]
 Precursor biosynthesis
  Amino acid ligase
   KP004_01680
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 CPSase_L_D2 ATP-grasp_3 RimK GARS_A ATP-grasp ATP-grasp_LDMS TTL
Other DBs
NCBI-ProteinID: QWV93929
UniProt: A0ABX8J8K7
LinkDB
Position
383001..383918
AA seq 305 aa
MTVADLKTKKIAVLMGGLSAEREVSLNSGKAVLASLQRQGFNAVGIDVGRDLAQRLAEEK
VELAFIALHGRFGEDGSVQGLLELMAIPYTGSGVLASALAIDKIAAKVMFASAGLKLAPY
QVLRRGEELKLENPLPVVVKPSKEGSSVGVSIVKQPDQMAKALEDAFRYDSEILIEAFIS
GKEVQVGILDGRAMGAIEIVPKNEFYDYEAKYTDGGAEHILPARLPENVYQAVLKEGEKA
HAALGCDCYSRVDFLVNEAGECYLLEVNTLPGMTDLSLLPEIARGSGIDFDQLVVRIISA
ASLKI
NT seq 918 nt   +upstreamnt  +downstreamnt
atgacggtagctgacctgaaaaccaagaagatcgccgtgctgatgggggggctgtccgcc
gagcgcgaggtgtccctgaacagcggcaaggccgtgctggcctccctgcagcgccagggc
tttaacgccgtcggcatcgacgtcggccgcgacctcgcccagcgcctggccgaggagaag
gtggagcttgccttcatcgccctgcacggccgcttcggcgaagacggttcggtccagggg
ctcctggagctgatggcgatcccctacaccggttccggcgtgctcgcctctgcgcttgcc
atcgacaaaatcgccgccaaggtgatgttcgcctcggccggcctgaagctcgccccttac
caggtgctgcgccgcggcgaggaattgaagctcgagaacccgctgccggtggtggtgaag
ccttccaaggaaggttcctcggtcggcgtcagcatcgtgaagcaaccggaccagatggca
aaggcgctcgaagatgcattccgctacgattccgagatcctgattgaagccttcatcagc
ggcaaggaagttcaggtcggcatcctggacggccgcgccatgggcgcgatcgagatcgtt
ccgaagaacgagttctacgactacgaggcgaagtacaccgacggcggcgccgagcacatc
ctccccgctcgcctgccggagaacgtgtaccaggcggtcctgaaggaaggcgagaaggcg
cacgcggcgctggggtgcgactgctacagccgtgtcgacttcctggtcaacgaggcgggc
gagtgctatctgctcgaggtgaacaccctgccgggaatgaccgacctgagtctgcttccg
gagatcgcccgcggctcgggcatcgatttcgatcaactggtggtgcgcatcatctctgcc
gcatcgctgaagatctga

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