Geomonas oryzisoli: KP004_02555
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Entry
KP004_02555 CDS
T07282
Name
(GenBank) IclR family transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
ger
Geomonas oryzisoli
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ger03000
]
KP004_02555
Transcription factors [BR:
ger03000
]
Prokaryotic type
Helix-turn-helix
IclR family
KP004_02555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR
MarR_2
POTRA
TrmB
HTH_34
RNA_pol_Rpc34
DUF4423
GAF
SbmA_BacA
DUF1192
Motif
Other DBs
NCBI-ProteinID:
QWV94088
LinkDB
All DBs
Position
577901..578683
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AA seq
260 aa
AA seq
DB search
MAKKEKSEYIIQAVSHALDLLEQFHDEVDELGVTELSKRLKLHKNNVFRLLATLESRNYI
EQNKVTENYRLGLKTLELGQTFIKQMGLLRQSRPVLEALVKECNETTYVAILKEFHIVYL
DVVETDLTVRVVPRVGARLPAYCTAAGKVQIAYMTDEELENYLPTKEMKRYTPKTVTDRE
ELKKHLKVIAEQGYAIDDEEMDVGVKCVGAPIRDYTRRIIGAVSISGPSMRFTDERLEKE
LIPLVIRSGEEISQKLGYHK
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaaagagaaatctgagtacatcattcaggccgtctcccacgcactcgacctc
ctggaacagttccacgacgaggtggacgaactgggcgttaccgagctgagcaagaggctg
aagcttcacaagaacaacgttttccgtcttctggctaccctggagtcgcggaactacata
gagcagaacaaggtaactgaaaactaccggctggggctcaagaccctggagctggggcag
accttcatcaagcagatgggtcttttgcgccagtcccgcccggtgctcgaggcgctggtc
aaggagtgcaacgagaccacctacgttgccatcctcaaggagttccacatcgtctacctc
gacgtggtggagaccgaccttaccgtcagggtggtaccgcgcgtcggcgcccgcctcccg
gcctactgcaccgccgccggcaaggttcagatcgcctacatgaccgacgaggagctggag
aactacctccccaccaaggaaatgaagcgctacaccccgaagacggtcaccgaccgcgag
gagctcaagaagcacctcaaggtgatcgccgagcagggctacgccatcgacgacgaggag
atggatgtcggcgtcaagtgcgtgggcgccccgatccgcgactacacccgtcgcatcatc
ggcgcggtgagcatctcgggcccctcgatgcgcttcaccgacgagcggctggagaaggaa
ctgatcccgctggtgatccgctccggcgaggagatctcccagaagcttggctaccacaaa
tag
DBGET
integrated database retrieval system
