Geomonas oryzisoli: KP004_03245
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Entry
KP004_03245 CDS
T07282
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
ger
Geomonas oryzisoli
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ger03400
]
KP004_03245
DNA repair and recombination proteins [BR:
ger03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
KP004_03245
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Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
QWV94222
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Position
complement(732315..732779)
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AA seq
154 aa
AA seq
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MEFAGCVWYFQGMDRISKEARSRNMQAIRSRNTEIEMTLRRALWASGIRGYRLCTQRIAG
TPDIVFTKQKVAIFVDGCFWHGCPICYRKPKTNSFFWEKKLAYNKARDLHNTTQLTEEGW
VVIRFWEHDVRKQLNLCISTIITAIKKEGTVEIN
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgccggctgcgtttggtattttcaaggcatggataggatcagtaaagaggcc
cgcagccgaaacatgcaagcgattcgcagtcggaatactgaaattgagatgactctcaga
agagccctgtgggcgtctgggatacgagggtatcgtctgtgcacccagaggatcgcagga
acccccgatattgttttcactaagcaaaaggttgccatatttgtcgatggctgtttttgg
catggctgcccgatttgctataggaagcccaaaacgaactcttttttttgggagaaaaag
cttgcgtacaacaaagcacgtgatcttcataacacgacacaacttacggaagagggctgg
gttgtcatcagattttgggaacatgatgtaaggaaacagctaaatttatgcatcagcaca
ataattacagctataaaaaaggaaggtactgttgaaatcaattga
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