KEGG   Geomonas oryzisoli: KP004_03800
Entry
KP004_03800       CDS       T07282                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
ger  Geomonas oryzisoli
Pathway
ger00521  Streptomycin biosynthesis
ger00523  Polyketide sugar unit biosynthesis
ger00525  Acarbose and validamycin biosynthesis
ger00541  Biosynthesis of various nucleotide sugars
ger01055  Biosynthesis of vancomycin group antibiotics
ger01100  Metabolic pathways
ger01110  Biosynthesis of secondary metabolites
ger01250  Biosynthesis of nucleotide sugars
Module
ger_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:ger00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    KP004_03800 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    KP004_03800 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    KP004_03800 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    KP004_03800 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    KP004_03800 (rfbB)
Enzymes [BR:ger01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     KP004_03800 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD Polysacc_synt_2 RmlD_sub_bind NAD_binding_4
Other DBs
NCBI-ProteinID: QWV94320
LinkDB
Position
862117..863187
AA seq 356 aa
MQDTFTPTSLLVTGGAGFIGSNFINHFMAGNPQCRVINLDLLTYAGNLKNLTAVEGNPNY
RFVKGDICDGELVARLLAEEKVDAVAHFAAESHVDRSITGPEIFVKTNVLGTQTLLEASR
LHAEKLPDFRFLQVSTDEVYGSLGPEGYFTEETPLAPNSPYSASKAGADLLVRAYFETFG
LPTLNTRCSNNYGPYHFPEKLIPLMIHNILKKRSLPVYGDGLNVRDWLHVKDHSAAIERV
LKQGRPGEIFNVGGNNEWKNIDIVKLVCDLMDERLGRAPGESRELITFVKDRKGHDRRYA
IDASKLKRELSWEPSYTFERGIAETIDWYLANQGWVEEVVSGAYREYYEMQYGATA
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgcaggatacgttcacccccacctctttactggttaccggaggggcgggattcatcggt
tccaacttcatcaaccacttcatggcggggaacccgcagtgccgggtgatcaacctggac
ctgctgacctacgccgggaatctgaagaacctgaccgcggtggagggaaaccccaactac
cgcttcgtgaagggtgacatctgcgacggcgagctggtcgcgcgtctgcttgccgaggaa
aaggtcgatgccgtggcccatttcgccgccgaatcgcacgtcgaccgctccatcaccggc
cccgaaattttcgtgaaaacgaacgtgctggggacccagaccctcctggaggcgagccgc
ctgcacgccgagaagcttcccgatttccgcttcctgcaggtttccaccgacgaggtgtac
ggcagcctcggcccggaggggtatttcaccgaggagacgccgctggcgcccaactccccg
tattccgcgagcaaggccggtgccgacctcctggtgcgtgcctacttcgagaccttcggc
ctgccgaccttgaatacccgctgctccaacaactacggtccctatcacttccccgagaag
ctgattccgctcatgatccacaacatcctgaagaaacgctcgctgccggtgtatggcgac
gggctgaacgtgcgcgactggctgcacgtgaaggaccattcagccgccatcgagcgggtg
ctgaaacaggggaggccgggcgagatcttcaacgtgggcggcaacaacgagtggaagaac
atcgacatcgtgaagctggtctgcgacctgatggacgagcgcctggggcgcgcgccgggg
gagagccgtgaattgatcaccttcgtcaaggaccgcaaggggcacgaccggcgctatgcc
atcgacgcctccaagctgaagcgcgagttgtcctgggagccgagttacaccttcgagcgc
ggcatcgccgagaccatcgactggtacctggccaaccagggatgggtcgaggaagtggtg
agcggcgcctaccgggaatactacgagatgcagtacggagcgacggcttaa

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