Geomonas oryzisoli: KP004_03860
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Entry
KP004_03860 CDS
T07282
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ger
Geomonas oryzisoli
Pathway
ger00020
Citrate cycle (TCA cycle)
ger00190
Oxidative phosphorylation
ger00650
Butanoate metabolism
ger00720
Other carbon fixation pathways
ger01100
Metabolic pathways
ger01110
Biosynthesis of secondary metabolites
ger01120
Microbial metabolism in diverse environments
ger01200
Carbon metabolism
Module
ger_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ger_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
KP004_03860
00650 Butanoate metabolism
KP004_03860
09102 Energy metabolism
00190 Oxidative phosphorylation
KP004_03860
00720 Other carbon fixation pathways
KP004_03860
Enzymes [BR:
ger01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
KP004_03860
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
AlaDh_PNT_C
GIDA
Motif
Other DBs
NCBI-ProteinID:
QWV94331
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Position
875664..877577
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AA seq
637 aa
AA seq
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MILDGKCPKGPIQTSWDRHRFDLKLVNPANKRKYKVLVVGTGLAGGAAAASLGELGYNVE
AFCYQDSARRAHSIAAQGGINAAKNYPNDGDSIYRLFYDTIKGGDFRAREADVWRLAQVS
NNIIDQCVAQGVPFARDYAGYLDNRSFGGAQVSRTFYARGQTGQQLLLGAYSALSRQVKA
GTVKLFARTEMLDLVVVDGEAKGITVRDLITGEIRTHVGDAVVLATGGYVNVFYLSTNAM
GCSVTANWRAHKKGAFFANPCYTQIHPTCIPQSGDHQSKLTLMSESLRNDGRCWAPKKKG
DNRHPNDIPEEERDYYLERKYPSFGNLAPRDIASRAAKEQCDDGRGVGPGGRGVNLDFSA
AIKRVGEHTIRERYGNLFEMYEKITDENAYKQPMRMYPAPHYSMGGLWVDYNCESNVPGL
FVLGEANFSVHGANRLGASALMQGLADGYFVIPYTIANYLAKTKPGTVSADHPECKKSVE
DVKAYNNRLLNINGKKTVSEFHRELGKIMWENVGMARSEESLKDAIKRIPVLREEFWNNV
KVTGKGEELNQQLENAGRVADFLEFGELMAKDALHRNESCGGHFRVEHQMPDGEAKRDDE
NYCYVGAWEFKGVDKEPELHKEPLTFENVHLAVRSYK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
gtgatactcgacggaaaatgtccgaaaggaccgattcagacctcgtgggacaggcaccgc
ttcgatctgaagctggttaaccccgccaacaagcgtaagtacaaggttctcgttgtcggc
accggcctggccggtggcgcagccgcagcctccctgggtgagctcggctacaacgtcgaa
gccttctgctatcaggacagcgcacgccgcgcccactccatcgcagcgcagggcggcatc
aacgcagcgaaaaactaccccaacgacggcgacagcatctaccgtctgttctacgacacc
atcaagggcggcgacttccgtgcccgcgaggcggacgtgtggcgtctggcccaggtgtcc
aacaacatcatcgaccagtgcgtggcccagggcgttccgttcgcccgcgactacgcaggc
tacctggacaaccgctccttcggcggcgcccaggtttcccgtaccttctacgcccgcggc
caaacgggtcagcagctccttctgggcgcttactcggctctgtcccgccaggtgaaagcc
ggcaccgtcaagctcttcgcccgcaccgagatgctggacctcgtggtggtcgacggcgag
gccaaaggcatcaccgtgcgcgacctgatcaccggtgagatccgcacccatgtgggtgac
gcggttgtccttgctaccggcggctacgtgaacgtcttctacctctccaccaacgcgatg
ggctgctcggtcaccgcgaactggcgtgcccacaaaaaaggcgccttcttcgcgaacccc
tgctacacccagatccacccgacctgcatcccgcagtccggcgaccaccagtcgaaactg
accctcatgtccgagtccctcagaaacgacggccgctgctgggcaccgaagaaaaagggc
gacaaccgtcaccccaacgacatcccggaagaagagcgcgactactacctggagcgtaag
tacccctccttcggtaacctcgctccccgcgacatcgcctcccgcgcagccaaagagcag
tgcgacgacggccgcggcgtcggccccggcggccgcggtgtgaacctcgacttctccgcc
gccatcaagcgcgtgggcgagcacaccatccgcgagcgctacggcaacctcttcgagatg
tacgagaagatcaccgacgagaacgcgtacaaacagccgatgcgcatgtacccggcaccg
cactactccatgggcggcctctgggtcgactacaactgcgagagcaacgtcccgggcctc
ttcgtcctgggcgaggcaaacttctccgttcacggcgcgaaccgcctcggtgcttccgcg
ctgatgcagggtctggccgacggctacttcgttatcccctacaccatcgccaactacctg
gccaagaccaagccgggcaccgtcagcgccgaccaccccgagtgcaagaagtcggtcgag
gacgtcaaggcctacaacaaccgcctcctgaacatcaacggcaagaagaccgtgtccgag
ttccaccgcgaactgggcaagatcatgtgggaaaacgttggcatggcgaggagcgaagag
agcctcaaggacgccatcaagcgtatcccggtcctgcgcgaggagttctggaacaacgtc
aaggtcaccggcaaaggcgaggagctcaaccagcagctcgagaacgccggccgcgtggcg
gacttcctcgagttcggcgagctgatggcgaaggacgccctgcacaggaacgagtcctgc
ggcggccacttccgcgtcgagcaccagatgccggacggcgaggcaaagcgcgacgacgag
aactactgctacgttggagcctgggagttcaaaggtgtcgacaaggagcccgaactgcac
aaggagccgttgacgttcgaaaacgttcatctggcggtaaggagttataaataa
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