Geomonas oryzisoli: KP004_03950
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Entry
KP004_03950 CDS
T07282
Symbol
ruvC
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
ger
Geomonas oryzisoli
Pathway
ger03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KP004_03950 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ger03400
]
KP004_03950 (ruvC)
Enzymes [BR:
ger01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
KP004_03950 (ruvC)
DNA repair and recombination proteins [BR:
ger03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KP004_03950 (ruvC)
RecFOR pathway proteins
KP004_03950 (ruvC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
PI3_PI4_kinase
MobC_2
Motif
Other DBs
NCBI-ProteinID:
QWV94348
LinkDB
All DBs
Position
complement(895165..895659)
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AA seq
164 aa
AA seq
DB search
MIILGIDPGSRKTGYGLISKQGNRLVHIDNGAIFTQSAKDFPQRLEKIFTGLSAIIAEYQ
PEVVAVEDVFLAKNAMSALKLGQARGAAIVAAVNVGLPVHEYTAMQVKQAVVGTGRAEKT
QVQQMIKALLNLPEVAQEDASDALAVAICHAHSAGISTLLKSMR
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgatcattctcggcatcgaccccggctcccgcaagaccggctacggcctcatctccaag
cagggaaaccgcctggtccacatcgacaacggcgccatcttcacccagagcgcgaaagac
ttcccgcagcggctggagaagatcttcaccggcctctccgcgatcatcgccgagtaccag
cccgaggtggtggcggtggaagacgtgttcctggccaagaacgccatgagcgcgctgaaa
ctggggcaggcgcgcggcgcggccatcgtcgccgcggtcaacgtggggctccccgtgcac
gagtacacggccatgcaggtgaagcaggcggtggtgggaaccggccgcgccgagaaaacg
caggtgcagcagatgatcaaggcccttttgaacctccccgaggtggcccaggaagatgcc
tccgacgccctcgccgtcgccatctgccacgcccactccgccggcatcagcaccctgttg
aaaagcatgcgctag
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