Geomonas oryzisoli: KP004_04040
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Entry
KP004_04040 CDS
T07282
Name
(GenBank) HAMP domain-containing protein
KO
K07642
two-component system, OmpR family, sensor histidine kinase BaeS [EC:
2.7.13.3
]
Organism
ger
Geomonas oryzisoli
Pathway
ger02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KP004_04040
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ger01001
]
KP004_04040
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ger02022
]
KP004_04040
Enzymes [BR:
ger01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
KP004_04040
Protein kinases [BR:
ger01001
]
Histidine kinases
OmpR family
KP004_04040
Two-component system [BR:
ger02022
]
OmpR family
BaeS-BaeR (envelope stress response)
KP004_04040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HAMP
HisKA
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
QWV94366
LinkDB
All DBs
Position
complement(913363..914811)
Genome browser
AA seq
482 aa
AA seq
DB search
MKVKIKYRLFFTMLAATGTVVICMFLIMQWSIGHGFLAYVNTMEKDRLQRLAHVLEQSYS
INGSWDFLQQEPSTWFDVVAGTREGREGGESDAAQRRMGRRGFMNLTGQGQHLPQRFAYR
FEGRVVLLDPDKRLIQGTQGSLETAQVKKLASDGEVIGYLALRPRQRLTDTYQLLFVQQQ
KLTMGLVAVVMLLVSAALSLPLANRLVEPIKRLAGSLHRLASGEYDTRVPVGSNDELGQL
ARDFNTLALSLENNERARRRYLADISHELRTPLSILRGEIEALQDGVRPLGPESMRSLHA
EVMHLGRLVEDLYQISMSDIGALNYRKELVDLTELMEDTLEPFAAKFRNKSIALKHELPG
EELTVFADGVRLNQLFSNLLDNSLKYTDQGGELSVRLRRDGGRAVVEFADSAPGVQPEEL
ARLFDRLFRVENSRNRALGGAGLGLAICKNIVEAHEGTIVAHPSPKGGVLIRIELPLTGS
WT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaaagatcaaatacaggctctttttcaccatgcttgccgcaaccggcaccgtg
gtgatctgtatgttcctcatcatgcagtggagcatcgggcacggcttcctcgcctacgtc
aacaccatggagaaggaccgactgcagcggctggcacacgtgctggagcagtcctacagc
attaacggcagctgggacttcctgcaacaggagccctccacctggttcgatgtcgtcgcc
gggacgcgggaagggcgcgaggggggcgaaagcgatgccgcgcagcgcaggatggggcgg
cgcgggttcatgaacctgaccggccaggggcagcacctgccgcagcgcttcgcctaccgt
ttcgaaggacgcgtggtgctgctcgatcccgacaagcgcctcatccaggggacccagggg
agcctggagaccgcgcaggtgaagaagctcgccagcgacggcgaggtgatagggtacctg
gcgctgcgcccgaggcagcggctcaccgatacctaccagctcctcttcgtgcagcagcaa
aaactcaccatggggctcgtggcggtcgtgatgctgctggtgtcggctgcgctgtcactc
cccctggccaaccgcctggtcgagccgatcaagaggctcgccggctccctgcaccgactc
gcctccggggagtacgacaccagggtgccggtgggctccaacgacgaactggggcagttg
gcccgcgacttcaacacgctggccctctccctggagaacaacgagcgggcccgccggcgc
tacctggcggacatttcccatgagctgcgcacgccgctctccatcctgcgcggtgagata
gaggcgctgcaggacggggtgcgtcccctgggacccgagtcgatgcgctcgctgcacgcc
gaggtgatgcacctggggcggctggtcgaggacctgtatcagatctccatgtccgacatc
ggcgcgctcaactacagaaaggagctggtcgacctgaccgagctcatggaagacaccctg
gagccgttcgccgcgaagttccgcaacaagagcatcgcgctgaagcacgagctccccggc
gaagagctgacggtgttcgcagacggggtccgacttaaccagcttttcagcaaccttttg
gacaactcgctcaagtacaccgaccaggggggcgagctgtcggtgcggctcaggcgtgac
ggtggccgggccgtggtggaatttgccgactcggcacccggggtgcagcccgaggaactg
gcccggctcttcgaccggctgttccgggtggaaaattcgagaaaccgcgccctgggcggc
gccgggcttggcctggccatctgcaagaacatcgtcgaggcgcacgagggaaccatcgtg
gcgcacccctcccccaaggggggggtgctgatcaggatagaactgccgcttaccgggagc
tggacatga
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