Geomonas oryzisoli: KP004_04255
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Entry
KP004_04255 CDS
T07282
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ger
Geomonas oryzisoli
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ger03032
]
KP004_04255
03036 Chromosome and associated proteins [BR:
ger03036
]
KP004_04255
03400 DNA repair and recombination proteins [BR:
ger03400
]
KP004_04255
DNA replication proteins [BR:
ger03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KP004_04255
Chromosome and associated proteins [BR:
ger03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
KP004_04255
DNA repair and recombination proteins [BR:
ger03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
KP004_04255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QWV94407
LinkDB
All DBs
Position
960518..960799
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AA seq
93 aa
AA seq
DB search
MTKSELIDKLVEVRGALTRKDSEAVVSMVFDAMSEALTNGDKVEIRGFGSFTIRDREPRE
ARNPKSGEIVSIPSKKTPFFKTGKDLRERVNNI
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgactaagagcgaattgatcgacaaactggtagaagtacgcggtgctctgacccgcaag
gactccgaggctgtggtctccatggtgttcgacgccatgagcgaggctctgaccaacggc
gacaaagtggaaatccgcgggtttggcagcttcaccatccgtgaccgcgagccgcgcgag
gcgaggaaccccaagagcggcgaaatcgtcagcatcccgagcaagaaaaccccgttcttc
aagaccggtaaggacctgcgcgagcgcgtgaacaacatctag
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