Geomonas oryzisoli: KP004_04490
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Entry
KP004_04490 CDS
T07282
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ger
Geomonas oryzisoli
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KP004_04490 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ger03019
]
KP004_04490 (rnc)
03009 Ribosome biogenesis [BR:
ger03009
]
KP004_04490 (rnc)
03036 Chromosome and associated proteins [BR:
ger03036
]
KP004_04490 (rnc)
Enzymes [BR:
ger01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
KP004_04490 (rnc)
Messenger RNA biogenesis [BR:
ger03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KP004_04490 (rnc)
Ribosome biogenesis [BR:
ger03009
]
Eukaryotic type
90S particles
RNase
KP004_04490 (rnc)
Prokaryotic type
rRNA processing factors
KP004_04490 (rnc)
Chromosome and associated proteins [BR:
ger03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
KP004_04490 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
PWWP_KDM3B
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
QWV94450
UniProt:
A0ABX8J7N4
LinkDB
All DBs
Position
1014683..1015381
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AA seq
232 aa
AA seq
DB search
MNEKLDDTLAGLEARIKYRFANPELLQEALTHRTYVNEAGGKDNQRLEFFGDAVLDFLLS
DLLLRRFPESREGELTKMRAALVDEVSLARIAAELELGASLRLGRGEEKGGGRQKRSLLA
DAFEALLAALYLDGGIEAARRVVHELFEPLLDSPDMLCGRDAKTELQEQARTLRRELPRY
QLKEATGPDHDRRFTVEVYLGDDLMGEGVGRTKKEAEQDAARAATFLLKGER
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaagctggacgataccctggcgggactcgaggcgcgcatcaagtaccggttc
gccaaccccgagctgctgcaagaggcgctgacccatcgcacctacgtcaacgaggcaggg
gggaaggacaatcagcggctggagttcttcggggacgccgtgctcgatttcctgctctcc
gatcttttgctgcgacgctttccggagagccgcgagggggagctgaccaagatgcgggcg
gcgctggtggacgaggtgagtctggcacgcatcgctgccgaactggagctgggcgcctcc
ctgcgcctcgggcgcggcgaggagaaagggggagggcggcagaaacgctcgcttttggcg
gacgccttcgaggccctgctcgccgcactctatctggacggcggcatcgaggcggcgcgg
cgcgtggtgcacgagctgttcgagcccctgctggattctccggatatgctctgcgggcgg
gacgccaagaccgagctgcaggagcaggcgagaaccctgcgccgggagctgccgcgctac
caactgaaagaggccaccggccccgaccacgaccgccgcttcaccgtcgaggtgtacctg
ggcgatgatctgatgggggagggggtgggcaggaccaagaaagaagccgagcaggacgcc
gcccgtgccgctaccttcctcctcaagggggagcggtga
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