Geomonas oryzisoli: KP004_04645
Help
Entry
KP004_04645 CDS
T07282
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
ger
Geomonas oryzisoli
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ger02000
]
KP004_04645
Transporters [BR:
ger02000
]
Other transporters
Pores ion channels [TC:
1
]
KP004_04645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
QWV95634
LinkDB
All DBs
Position
1052297..1056709
Genome browser
AA seq
1470 aa
AA seq
DB search
MGLLIVLSLGLFWLLGTGSGARFALTTLGGLAGEKVTVRQVEGRLWDRLRLTGVRLDRPK
VVLQLERLDLAWAPVGLLHGRLLVHDLSLTALRIQDDTPLVAKTPQLRWPKVSETVRRLE
ARVERFSLKGMSYRHFQGDPFLLSELAGGLTLRDGVLTVSAGSVSAAQGSASGEITAGLL
RPSLHLDLRLAPATPMADLDAISVLARLEPGREPEQLAGPVALAGSRQGAKRLDLTSELG
ITRTGFNFRNFHMLRPGRPGVLTGNGSMTLTKDEPLFALALHADHLDLGRELDHPALIDG
DLTFSGSPARYLGTFSLTNKGPGWESMGLAARYRGDKNGLRLDPLSGTWLKGSVHGALDV
EWSRGWRVSGKLSGRGLDPEALAADWKGVVNLDLAGVVGQHDRGAVQGSVQARLLESRLK
GQELTGAVEGSFTGARIAVQRLLLAGKGFRFRGSGEPDRRFDFAADVTDLSGLLPGSAGA
VAADGWLRWREGMLSGTAAARGMNLAMGGVRAGAFDLQASLGEGKDYPVSLRGTATAVRA
GQLAVEAASFALRGTSRRHTFAARLTSGVADVDLSASGGYADGVWRGELSRFSGNDEVGP
FALAAPAQVTVGQGRFSTTPLVIDGAPGERLELAGNLNRDRSGAFRGGWSGLNLARADVW
LPKGELSGATSGSFDLHLAPGGRATLNVRAEASGAVVADGKRVGLDHFLATLKGGERGVD
AAADLALEKGAGSARLTFHSGEPAALALPRRGDLTIDWSNLDLTLLRPYLSPELNLEGRL
GGQVKGTLLPGRRMDLSGTTALTGGRVIWRAKGDQFDAAIDRAELAFQRRDTGKPGGEMV
LHGSADATGAYQSQGEKVIGSQFTVRVDADGTGTRAAADLWLDTGGSLRAALSSDSPAGS
ALPETGDFSVEWDDIKPSLLRPWLPGTMDLQGELHGSAKGRLLPGKRLELAGQAGFSQGS
ARWQGNAGEASAAIRSALVNFAWRGESLTGNLDLSLADYGQAKGDFLLPIPARLPVTPNR
DGAVQGRLSGSLQEHGFLTAFFPGLVQETRGTLTVDIMAGGTWGDPTVNGTLELADAGAY
LPSAGITLTGAQLLARLDHNEMRIERLRALSGGGELVGNLLMRLKGWQVQDYRGTLSGQR
FQTVYLPELTMYTSPQLTFEGDAKKATVNGEVGIPEMLISGSPAQHVVAPSEDVVFEGAP
PKAKEPRIPLLVDGKVKVVLGDKVKVEASGIDAQLGGSMDLVLNGIDKIESSGEIKVVKG
RYRAYGMNLDIVRGRIYYVNDPVTRPTLDVLALRTVGDVKAGVTVGGFLNAPVVKLYSEP
AMPEVDILAYMVLGHPMGTSGEQGSALATAAAGLFSFGKSESLQEQIKDRLGLSTLGLEQ
VDTTSTGRMGYKEIATTPTGAISAKTPAAGESVFSVGKYLTPDLYLSYGRSLITGQNLFR
LRYDIFKRLQIETQSGSESGVDLYYKLEFR
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
ctggggctcctcatcgtcctgtcactggggctcttctggctgctcggcaccggctccggc
gcgcgcttcgccctcaccaccctcggagggctcgccggggaaaaggtgaccgtgcggcag
gtcgaggggcggctttgggaccggctgaggttgaccggggtgcggctggaccgccccaaa
gtggtgctgcagctggagcggctggatcttgcctgggcaccggtcggtctcctgcacggc
aggctcctggtgcacgatctctccctgaccgcgctgcgcatccaggacgacacgccgctg
gtagccaagacgccgcagctgcgctggcctaaggtaagcgagaccgtgcgtcgactggag
gcgcgggtggagcgcttcagcctgaagggtatgagctaccgtcacttccagggcgacccc
ttcctgctgagcgagctggcaggcgggttgaccctgcgcgacggcgtcctcaccgtctcg
gcagggagcgtttccgccgcccaagggagcgcgtcgggcgaaataaccgcaggacttttg
cgcccctcgctgcacctcgacctgcgcctcgccccggccacgccgatggcggacctggac
gccatttcagtgctggcgcgcctcgagccggggcgggagcccgagcaactggccgggccg
gtcgcgctcgccggcagccgccagggagcaaaacgcctggacctcaccagcgagctcggc
atcacccgcaccggtttcaatttcaggaacttccatatgctgcgccccggccgccccggg
gttctcaccggcaacggcagcatgaccctcaccaaggacgagcccctcttcgcgctggcg
ctccacgccgaccatctcgacctcgggcgggagctcgatcatcccgccctcatcgacggc
gacctcaccttctccgggagcccggcccgctacctgggcaccttctccctcaccaacaag
gggcccggctgggagagcatggggcttgccgcgcgctatcgcggcgacaagaacgggctg
cgcctggaccctctctccggcacgtggctcaaggggagcgtgcacggcgcgctcgacgtg
gagtggagccgaggctggcgggtgagcgggaaactatccggccggggcctcgatccggaa
gcgcttgccgcggattggaaaggggtggtgaacctcgacctggccggggtggtggggcag
catgaccggggggcggtgcaggggagcgtgcaggcgcggctcctcgagagcaggctgaag
gggcaggagctgaccggcgcagtagaggggagcttcaccggcgcgaggatcgcggtgcag
cgtctgctgctggcggggaaagggttcaggttccggggcagcggcgagcccgaccggcgt
ttcgatttcgcggccgacgtgaccgatctctcggggctgctgccgggaagtgccggtgcc
gttgccgccgacggctggctgcgctggcgcgaggggatgctctccggtaccgccgccgcc
agggggatgaacctggcgatgggcggcgtccgcgccggtgccttcgacctgcaggcaagc
ctcggtgaggggaaggattacccggtttcgctgcgggggacggcgaccgccgtgcgggcc
ggacagctggcggtggaggccgcctccttcgcgctgcgcggcacctccaggcggcacact
ttcgcagcgcggctcacctccggcgtcgccgacgtcgatctttccgcctcgggcggttat
gccgacggcgtctggcgcggcgagctctcccgcttctccggcaacgacgaggtgggaccc
ttcgcgctcgccgccccggcgcaagtgaccgtcgggcaggggcgcttcagcaccacgccg
ctggtcatcgacggcgctcccggcgagcggctggaactggccggcaacctgaaccgcgac
cgctcgggcgccttccggggcggctggagcgggctgaacctggcgcgggccgacgtctgg
ctccccaagggggagctctccggcgccacttccggcagcttcgacctgcacctcgccccc
ggtgggcgtgccaccttgaacgtccgcgccgaggcgagcggcgccgtggtcgcagacggc
aagcgggtcgggctggaccacttcctggcgacgctaaagggaggggaacggggggtggat
gccgccgccgatctcgccctggaaaagggtgccggcagcgcccgtctcaccttccattcc
ggtgagcccgcagccctggcgctgccgcggcgcggcgatctcaccatcgactggagcaat
ctcgacctgacgctgctgcgcccctatctctcgcccgagctgaacctggaggggaggctt
ggcggccaagtgaagggaacgctcctgccgggacggcgcatggacctctccggcaccacc
gcgctcaccggcggccgggtcatctggcgggccaagggggaccagttcgacgccgccatc
gaccgggcggaactcgccttccagcggcgcgacaccggcaaacccggcggcgaaatggtc
ctgcacggcagcgccgacgccaccggggcctaccagtcccagggggagaaggtgatcggc
agccagttcaccgtccgcgtcgacgccgacggcacagggacccgcgccgctgccgatctc
tggctcgacaccggcggcagcctccgggccgcgctttcctccgactctccggccggcagc
gcgcttcccgagaccggcgacttcagtgtcgagtgggacgacatcaagccatccctgctg
cgtccctggctcccggggaccatggacctccagggggagctgcacggcagcgccaaggga
aggctcctccccggcaagcggctggaactggcggggcaggcgggcttctcgcaggggagc
gcccggtggcagggcaatgccggcgaggcgagcgccgccatccgttcggccctggtgaac
ttcgcctggcgcggcgagagcctgaccggcaacctcgacctctccctcgccgactacggg
caggccaagggcgattttctcctgccgataccggcacggttgccggtgactcccaaccgg
gacggtgcggtgcaggggcgcctgtcggggagcctgcaggagcacggattcctcactgcg
ttcttcccggggctggtgcaggagacccgcggcacgctcaccgtcgatatcatggccggg
gggacctggggcgatcccaccgtgaacgggaccctggagctcgccgatgcgggtgcctat
ctccccagcgcagggatcaccttgaccggggcgcagctcctggcgcgcctggaccacaac
gagatgcgcatcgagcggctgcgggcgctctccggtggcggcgagctggtcggcaacctg
ctgatgaggctcaaggggtggcaggtgcaggattaccgcggcaccctgagcgggcagcgt
ttccagaccgtgtacctgccggaactgaccatgtacacctcgccgcaactcactttcgaa
ggcgatgcgaaaaaggccaccgtcaacggcgaggtcggcatccccgaaatgctgatctcc
ggctcccccgcccagcacgtggtcgcgccgagcgaggacgtcgttttcgagggggctccc
ccaaaagccaaggagccgcgcatcccgttactggtagatgggaaggtgaaggtggtgctc
ggggacaaggtgaaggtggaggcgtccggaatcgacgcgcagctcggggggagcatggac
ctcgtgctgaacgggatcgacaagatcgagagttccggggagatcaaggtggtcaaggga
cgctaccgcgcctacggcatgaacctcgacatcgtgcggggacggatctactacgtgaac
gacccggtcacccgtcccaccctcgacgtcctggccctgcgcacggtcggggacgtcaag
gcgggggtgaccgtgggcgggttcctgaacgccccggtggtgaagctctactccgagccg
gccatgcccgaggtggacatcctggcctacatggtgctcgggcatcccatggggaccagc
ggcgagcaggggagcgcgcttgccaccgccgcggccggcctgttctccttcggcaaatcc
gagtcgctgcaagagcagatcaaggaccggctcggcctgagcacgctggggctggagcag
gtcgacaccacgagcaccggacggatggggtacaaggagatcgccaccaccccgaccggc
gccatttccgccaagacccccgccgcaggcgaatcggtcttctcggtcggcaagtatctc
actccggatctctacctcagctacggccggtcgctgatcaccgggcagaacctgttccgg
ctgcgctacgacatcttcaagcgcctgcagatcgaaacccaaagcggctccgagtccggc
gtggatctctattacaagctggagttcaggtga
DBGET
integrated database retrieval system
