KEGG   Geomonas oryzisoli: KP004_05305
Entry
KP004_05305       CDS       T07282                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
ger  Geomonas oryzisoli
Brite
KEGG Orthology (KO) [BR:ger00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ger02044]
    KP004_05305 (tssC)
Secretion system [BR:ger02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   KP004_05305 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QWV94601
UniProt: A0ABX8JBT1
LinkDB
Position
1188506..1189990
AA seq 494 aa
MEELTREKRVQFAEPEPAPQLLDIIVTEGRLARCEEQQEYAKEMLVELVRQVVAGEMVYS
GDTVRMIHARIAEIDRLVSDQVNEIIHHAEFQKLEASWRGLSYLVHQAETGSNLKIRVLN
ASKQELARDMEKAAEFDQSSLFKKVYEEEFGSFGGAAYGCLVGDYEFGNTPQDLSLLTRM
SEVAAAAHAPLLTSASSTLFGVDSYAGLDGPRDLAKVFQGADYARWRSFRVSEDAKYVAL
CLPHVLMRLPYGLDSEPVESFQFEEITGGDHDKYLWGNAAYCLAGRITDAFSRYGWTAAI
RGVEGGGAVADLPIHTFDTGEGELAAKCPTEIAITDRREKELADMGFVPLVHCKGTDMAA
FFSVQSAHKPKLYDTDAANANARLSAQLQYILAVSRFAHYLKAMMRDKIGSFGTRKNVED
YLNRWISRYVLLDDDAGQEMKARFPLREARIEVFDQPGRPGSYRAVAFLKPHYQLDELTI
SLRLVANLPAPRTS
NT seq 1485 nt   +upstreamnt  +downstreamnt
atggaagaactcacgagagaaaagcgggtgcagttcgccgagccggagcctgccccgcag
ttactcgacatcatcgtcaccgaagggcgtcttgcccgctgcgaagagcagcaggaatac
gcgaaggagatgctggtcgaactggtacggcaagtagtggccggggaaatggtctatagc
ggcgacaccgtgcggatgatccatgccaggatcgccgagatcgaccggctcgtcagcgac
caggtgaacgagatcatccatcacgccgagttccagaaactggaggcgtcctggcgcggg
ctttcctacctggtgcaccaggcggaaaccgggagcaacttgaagatccgggtgctgaac
gcgtccaagcaggaactggcccgggacatggagaaggcggccgagttcgaccagtcctcg
ctcttcaagaaggtctacgaggaggagttcggcagcttcggcggcgcggcgtacggttgc
ctggtgggggattacgagttcggcaacaccccgcaggacctgtcgctattgaccagaatg
tcggaggttgccgccgcggcacacgctccgcttctcacctcggcgtcttcgaccctgttc
ggggtggacagttatgccgggctcgacggaccgagggacctggccaaggtattccaggga
gccgattacgcacggtggcgctcgtttagggtgtccgaggatgcgaagtacgtggcgcta
tgcctgccgcacgttttgatgcggctgccgtacggcctggacagcgagccggtcgagtcg
ttccagttcgaggagatcaccggcggcgaccatgacaaatatctctggggcaatgccgcc
tactgtcttgccggccgcatcaccgatgctttctcgaggtacggctggaccgcggccatc
cgcggcgtggaagggggcggggcggtcgccgacctgccgatccacaccttcgatacggga
gagggggaactggcggcgaagtgcccgaccgagatcgccatcaccgaccggcgcgagaag
gaactcgccgacatggggttcgtccccctggtgcactgcaaggggaccgacatggccgcg
ttcttcagcgtccagagcgcgcacaaacccaaactctacgacaccgatgccgccaatgcc
aacgccaggctctcggcgcaactgcagtacatcctggcggtgtcccgttttgcccactat
ctgaaggcgatgatgagggacaagatcggcagcttcgggaccaggaagaacgtggaggat
tacctgaaccgctggatcagcaggtacgtgctgctggatgacgatgcggggcaggagatg
aaggcgcgtttcccgttgagggaagcccgcatcgaagtcttcgaccagccggggcggccg
ggcagctatcgcgccgtcgctttcctcaagccgcactaccaactggatgagctcaccata
tccttgcggctcgttgcgaaccttcccgcaccgcgcacgagctga

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