KEGG   Geomonas oryzisoli: KP004_05310
Entry
KP004_05310       CDS       T07282                                 
Name
(GenBank) type VI secretion system tube protein Hcp
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
ger  Geomonas oryzisoli
Pathway
ger03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ger00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    KP004_05310
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ger02044]
    KP004_05310
Secretion system [BR:ger02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   KP004_05310
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: QWV94602
LinkDB
Position
1190023..1190520
AA seq 165 aa
MAFDAFLKIEGIPGESSDDKHRDWIEVLSYNFSVTQPTSGTASSAGGASAERASFSDFSV
VKVLDKASPKLFEACATGKHIPTVTLEICRAGGDKLKYMEYKLSNVIISLNRPGGSAHGG
EAIPVEEIAFNYGKIELAYTQQNRSDGSGGGQVAAGWNLETNKKV
NT seq 498 nt   +upstreamnt  +downstreamnt
atggccttcgacgcattcttgaaaatagaaggaattccgggagagagcagcgacgacaag
cacagggactggatcgaggttctctcctataacttctccgtcacccagcccacctcaggt
accgccagcagcgcaggcggcgcctcggcggagcgcgcgagcttctccgacttcagcgtc
gtcaaggtgctggacaaggcgagccccaagctcttcgaagcctgtgccaccggcaagcat
atccccacggtcaccctcgagatctgccgggccggcggcgacaagctgaagtacatggaa
tacaagctcagtaacgtcatcatcagcctgaaccgccccggcggcagcgcccacggcggc
gaagccatccccgtcgaggagatcgccttcaactacggcaagatcgagctcgcctacacc
cagcaaaaccgctccgacggctccggcggagggcaggtggcggcagggtggaacctggag
accaacaagaaggtatga

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