Geomonas oryzisoli: KP004_06220
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Entry
KP004_06220 CDS
T07282
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
ger
Geomonas oryzisoli
Pathway
ger00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KP004_06220 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ger01007
]
KP004_06220 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ger03016
]
KP004_06220 (aspS)
03029 Mitochondrial biogenesis [BR:
ger03029
]
KP004_06220 (aspS)
Enzymes [BR:
ger01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
KP004_06220 (aspS)
Amino acid related enzymes [BR:
ger01007
]
Aminoacyl-tRNA synthetase
Class II (A)
KP004_06220 (aspS)
Transfer RNA biogenesis [BR:
ger03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
KP004_06220 (aspS)
Prokaryotic type
Other AARSs
KP004_06220 (aspS)
Mitochondrial biogenesis [BR:
ger03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
KP004_06220 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
QWV94771
UniProt:
A0ABX8JCG4
LinkDB
All DBs
Position
1403768..1405552
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AA seq
594 aa
AA seq
DB search
MIDFLGDWKRTSYCGELRAEHIGQDVVLMGWVAKRRDHGGLIFVDLRDRDGVAQVVFDPE
RNADAHAKAETARNEFVLAIKGTVAARPEGTVNPKMKTGEVEVLVKECKLLNPSKALPFT
LDGFVDVNENIRLKYRYLDLRTGQLQQNLILRSKVAQLTRSYLTDNGFLELETPFLTKST
PEGARDFLVPSRINKGEFYALPQSPQLFKQILMVSGFDRYFQIVRCFRDEDLRADRQPEF
TQIDCEMSFIDREDIITVMEGLMARIFSEARGVKVELPIQRMTYQEAIRRFGVDNPDLRF
GLELVELSDIVKNSGFKVFADVVNGGGIVKGINVKGAGAMSRKEIDDLTEFAKIYGAKGL
AYVKMTAEGWQSPIAKFFTPEEIATMDKAFDAQEGDLLLFVADKPKVVNDSLGKLRNHLA
AKMGLTDPNVFRFVWITDFPLLEWDEEEKRWAAVHHPFTAPMDEDLQYVESDPGRCRAKA
YDLVLNGNEIGGGSIRIHQEEVQSLMFKMLGLSEESARGKFGFLLDALEYGTPPHGGIAF
GLDRLMMLITGSDSIRDVIAFPKTQKGACLMSEAPSGVDTLQLRDLGIRLAAKQ
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgatagattttctgggcgattggaagagaaccagttattgcggcgagttgcgggccgag
cacatcggtcaggacgtggtcctgatggggtgggtagccaagcggcgcgaccacggcggg
ctcatcttcgttgacctgcgcgaccgcgacggcgtcgcccaggtggttttcgacccggaa
agaaacgccgacgcgcacgccaaggccgagaccgccaggaacgaattcgtcctcgccatc
aagggaaccgtggcggcgcgtccggaagggacggtgaacccgaagatgaagaccggcgag
gtcgaggtgctggtaaaagagtgcaagctcctcaacccctccaaggcgcttcccttcacc
ctggacggcttcgtcgacgtcaacgagaacatccgcctcaagtaccgctacctcgacctc
aggaccgggcagctgcagcagaacctgatcctgcgctccaaggtggcccagctcacccgc
tcctacctgaccgacaacggcttcctggagctggagaccccgttcctgaccaagtccacc
cccgaaggcgcccgcgacttcctggtcccgtcccgtatcaacaagggtgagttctacgcc
ctgccgcagtccccgcagctcttcaagcagatcctcatggtctccggtttcgaccgctac
ttccagatcgtgcgctgcttccgcgacgaggacctgcgcgccgaccgccagcccgagttc
acccagatcgactgcgagatgtccttcatcgaccgcgaagacatcatcaccgtgatggaa
ggtctcatggcccgcatcttctccgaggcgcgcggcgtgaaggtcgagctcccgatccag
aggatgacctaccaggaggcgatccgccgcttcggcgtcgacaacccggacctgcgcttc
ggcctcgagctggtggaactctccgacatcgtcaagaattccggcttcaaggtcttcgca
gacgtggtcaacggcggcggcatcgtcaaggggatcaacgtgaagggcgccggcgccatg
agccgcaaggagatcgacgaccttaccgagttcgccaagatctacggcgccaagggcctt
gcctacgtgaagatgaccgcggaagggtggcagtccccgatcgccaagttcttcaccccg
gaagagatcgccactatggacaaggccttcgacgcacaggaaggcgatctgctcctgttc
gtggccgacaagccgaaagtagtcaacgactccctcggcaagctcaggaatcacctcgcc
gccaagatggggctcaccgatccgaacgtgttccgtttcgtctggatcaccgacttcccg
ctgctcgagtgggacgaggaggagaagcgctgggccgcggtgcaccacccgttcaccgcg
ccgatggacgaggatctgcagtacgtggagagcgaccccggccgctgccgcgccaaggcc
tacgacctcgtgctcaacggtaacgagatcggcggtggttccatcaggatccaccaggaa
gaggtccagtccctcatgttcaagatgctcggcctctccgaagagagcgcgcgcggcaag
ttcggcttcctgctcgacgcgcttgagtacggcaccccgccgcacggcggcatcgccttc
ggcctggaccgcctgatgatgctcatcaccggctccgactccatccgcgacgtcatcgcc
ttccccaaaacccagaagggcgcctgcctcatgtccgaggctccctccggcgtcgacacc
ctgcagttgcgcgacctgggcatccgtctcgccgcgaagcagtaa
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