Geomonas oryzisoli: KP004_07410
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Entry
KP004_07410 CDS
T07282
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
ger
Geomonas oryzisoli
Pathway
ger02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KP004_07410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ger03021
]
KP004_07410
Transcription machinery [BR:
ger03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KP004_07410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Rrf2
Motif
Other DBs
NCBI-ProteinID:
QWV94994
UniProt:
A0ABX8JBQ2
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All DBs
Position
1669694..1670692
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AA seq
332 aa
AA seq
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MENDELLEEKDPLFLDGEHDPDPDSLELEEVEEVEEDEHAEVEEEEIKVAVVEHFDDAIK
LYLREIQKTKLLTADEEKELAARIDQGDKAARDRMIVSNLRLVVKIAKRYINRGLPFLDL
IEEGNMGLIKAVERFKLSKECRFSTYATWWIRQSIERALVNQSRTIRLPVHVSDDINKML
RVTRELVQKMNREPTVKEVADALEVNVTYVRRLMVLLKKTYSIERPMGENNDYFLIDTIE
DTSTVSPAVLLEDLNKYELVSEWFETLSDAEKKILTLRFGLDDKDPQTLDTIGRSFGVTR
ERIRQIEAKSLEKLRKIVEATDIMGRGTTTAK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgacgagcttttggaggagaaggaccctctctttcttgacggcgaacatgac
cctgatccggactcactcgaactcgaagaggtggaggaggtcgaggaggacgagcacgcc
gaggtcgaggaagaagagatcaaggtggccgtcgttgagcacttcgacgatgccatcaag
ctgtacctgcgcgagatccagaagaccaagcttctgaccgccgacgaggagaaggagctc
gccgcgcgcatcgaccagggcgacaaggcggcgcgcgatcggatgatcgtctccaacctg
cgcctggtggtgaagatcgccaagcgctacataaaccgcggccttcccttcctggacctg
atcgaagaggggaacatggggctcatcaaggcggtggaacgcttcaagctctccaaggag
tgccgtttctccacctacgccacctggtggatccggcaatccatcgagcgtgccctggtg
aaccagtcgcgcaccatccgtctgccggtgcacgtctccgacgacatcaacaagatgctc
agggtgacccgcgagctggtgcagaagatgaaccgggagccgaccgtgaaggaagtcgcc
gacgcgctcgaggtgaacgtcacctacgtgcgccggctcatggtgctcctgaaaaagacc
tattccatcgagcgccccatgggggagaacaacgactacttcctgatcgacaccatcgag
gacacctcgaccgtgtcgccggcggtgctgctcgaggacctgaacaagtacgaactggtc
tctgagtggttcgagaccctctccgacgccgagaagaagatcctgacccttcgtttcggc
ctggacgacaaggacccgcagacgctggacaccatcgggcgcagtttcggcgtgacccga
gagcgcatccggcagatcgaagccaaatcacttgagaaactgagaaagatcgtcgaagcc
accgacataatggggcgcggcacaactactgcgaaataa
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