Geomonas oryzisoli: KP004_08445
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Entry
KP004_08445 CDS
T07282
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ger
Geomonas oryzisoli
Pathway
ger00550
Peptidoglycan biosynthesis
ger01100
Metabolic pathways
ger01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KP004_08445 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KP004_08445 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ger01011
]
KP004_08445 (mrdA)
Enzymes [BR:
ger01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KP004_08445 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ger01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KP004_08445 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Tox-URI2
Motif
Other DBs
NCBI-ProteinID:
QWV95190
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Position
1903376..1905283
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AA seq
635 aa
AA seq
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MKPLNNILPEDDGGGRRIIGLSLGACAMFFLLLSRLWYLQVISAEDLIDQSENNRLRFVP
VAAPRGAILDRNGKVLVSNTPSFSVAVIPQDVKNKEQLIDNLARYLNLDRTEIETKWNKG
QGRAKYYPLVVASGITRDQMEFLEENRLALSGVNIEMKPIRAYTNGSLASHLLGYLGEVS
EDELNSERYREYNAGDYIGKSGIERAWENYLHGTDGGRQIEVDARGRFLRTVAETGSSVG
NTVMLTIDLDLQKAAEQALGDQAGAAVAMDVNTGEILAFVSSPDFDPANFTGRMPPEVWK
KYLEDERHPLENKALKGMYPPGSTFKIITAIAGLEEGLIDEHTTIQCTGSYKFGNATFRC
WDHKGHGTVDLKKSLRESCDVYYYKLAERLGVDRIAKYAKRFGLGAPLGIGLENEKGGVI
PTQDWKLKRFGKKWYSGETLPVGIGQGYVLTTPVQLASMISTVANEGTILRPHLVKRVVD
SDGKVLQDFAPQVLGKTGLKPATYRFVKEGLLAVVNEAHGTGGSSRLWEVKVAGKTGSSQ
VVKLRDSKGGVPYRFRDHALFVAFAPFEKPEIAVAVIVEHGEHGGSAAAPVAGKVLRAYF
EGKGVIKKPVPKAVPKEEEGGEGVAEPDTAPPAQQ
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgctcaacaacatccttcccgaggacgacgggggcggccgccgcatcatcggc
ctgtccctgggcgcctgcgccatgttcttcctgctcctgtccagactttggtaccttcag
gtgatcagcgccgaggatctgatcgaccagtccgagaacaaccggctccgcttcgtcccg
gtggcggccccccgcggagccatcctggaccgcaacggcaaggtgctggtctccaacacc
ccctcgttctcggtcgccgtcatcccgcaggacgtcaagaacaaggagcagttgatcgac
aacctggcccgctacctgaacctcgaccgcaccgagatcgagaccaagtggaacaagggg
caggggagggcgaagtactatcccctcgtggtggcttccgggatcacccgggaccagatg
gagttcctggaggaaaaccgtctcgccctctccggggtcaacatcgagatgaagccgatc
cgggcctacaccaacggttcgctcgcctcgcaccttctggggtacctcggcgaggtttcc
gaggacgagttgaacagcgagcgctaccgcgagtacaacgccggcgactacatcggcaag
agcggcatcgagagggcctgggaaaactacctgcacggcaccgacggcggtcgccagatc
gaggtggacgcgcgcggccgtttcctgcgcaccgtggctgaaaccggttccagcgtcggc
aacacggtcatgttgaccatcgacctcgacctgcagaaggccgccgagcaggcgttggga
gaccaggccggcgccgccgtggccatggacgtcaacaccggcgagatcctcgccttcgtc
tccagccccgatttcgacccggccaacttcaccggccgcatgcctcccgaggtctggaag
aagtacctcgaggacgagcgccaccccctggagaacaaggcgctcaaggggatgtatcct
cccggatccaccttcaagatcatcaccgccatcgccgggctggaggaggggctgatcgac
gagcacaccaccatccagtgcacgggctcctacaagttcggcaacgcgaccttccgctgc
tgggaccacaaggggcatggcaccgtggacctgaagaagtcgctccgggaatcctgcgac
gtctactactacaagctggccgagcgtctgggcgtggaccgcatcgccaagtacgccaag
cgtttcggcctcggtgcgccgctgggtatcggtctggagaacgagaaggggggggtgatc
cccacccaggactggaagctcaagcgcttcggcaagaaatggtactcaggcgagaccctt
cccgtcggcatcggccaggggtacgtgctcaccaccccggtgcagcttgcctccatgatc
tccacggtagccaatgaagggaccattctgcggccgcatctcgtcaagcgcgtggtcgat
tccgacggcaaggtgctgcaggacttcgcgccccaggtgctggggaagaccggccttaag
cccgcgacgtatcgcttcgtcaaggaaggtctgctggcggtcgtcaacgaggcgcacggt
accggcggcagttccaggctgtgggaggtcaaggtggcaggcaagaccggctcctcgcag
gtcgtcaaactgcgcgacagcaaagggggagtgccgtaccgcttccgcgaccacgcgctc
tttgtcgccttcgcgccgtttgagaagccggagatcgccgttgccgtcatcgtcgagcac
ggcgagcacggcggctcggcagcggcgccggttgccggcaaggtgttgcgtgcctacttc
gaggggaagggcgtcatcaagaagccggtgcccaaggcggtccccaaggaagaagaaggt
ggcgaaggtgtcgccgagcccgataccgcccccccggcgcagcaataa
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