KEGG   Geomonas oryzisoli: KP004_09115
Entry
KP004_09115       CDS       T07282                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ger  Geomonas oryzisoli
Pathway
ger03030  DNA replication
ger03430  Mismatch repair
ger03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ger00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KP004_09115
   03430 Mismatch repair
    KP004_09115
   03440 Homologous recombination
    KP004_09115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ger03032]
    KP004_09115
   03400 DNA repair and recombination proteins [BR:ger03400]
    KP004_09115
Enzymes [BR:ger01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KP004_09115
DNA replication proteins [BR:ger03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     KP004_09115
DNA repair and recombination proteins [BR:ger03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     KP004_09115
SSDB
Motif
Pfam: RNase_T RNase_H_2
Other DBs
NCBI-ProteinID: QWV95680
UniProt: A0ABX8JB72
LinkDB
Position
2055746..2056654
AA seq 302 aa
MNALEIEIAIASLHNTGDYQVLRRLNLARDARLGRPGPSHAKVALCLDTETTGLNHKQDK
VIELGIVAFEFDAESGEIYRITDRYSGFEDPGFAIPPEVREITGLSDDMVRGQSFDDAFI
TSLAEKADLVIAHNAAFDRKFVETRFPAFVSLPWACTVCQIDWGAERLSSRTLEFLLFKT
GSLTINAHRALDDAEGVLGLLLERLPVSGAPIFLELLKRAHEVTSRIYAVSAPFDKKDVL
KERGYRWSDGTQGGSKAWWRDVPAHEEPEELAYLAREIYPRGNTSAVQIMRCDAYARFSV
RE
NT seq 909 nt   +upstreamnt  +downstreamnt
atgaacgcgctggagatagaaatcgccatcgcgtcgttgcataacacgggggattaccag
gtgctgcggcgcttgaacctggcgcgggatgccaggctcggccgtcccggcccaagccac
gccaaggtcgccctttgcctcgataccgagaccaccggtttgaaccacaagcaggacaag
gtcatcgagctcggtatcgtcgccttcgagttcgatgccgaaagcggcgagatttaccgg
atcactgaccgctattccggtttcgaagaccccggcttcgccatcccccccgaggtgcgg
gagatcaccggcctctcggacgacatggtgcgcggccagagcttcgacgacgccttcatc
acatccctggccgagaaggcggatcttgtcatcgcccacaacgcggccttcgaccgcaag
ttcgtggaaacccgctttcccgccttcgtgagccttccctgggcctgcaccgtctgccag
atcgactggggtgcggagcggctttcctcgcgcaccctggagtttctcctgttcaagacc
ggttccctcaccatcaacgcccaccgcgcgctggatgatgccgagggggtgctcgggctt
ttgctggagcgtttgccggtgagcggcgcgccgattttcctggagctgctgaagcgggcc
cacgaggtcacctcgcgcatctatgcagtatcggcccccttcgacaagaaggatgtgctc
aaggagcgcggctaccgttggagtgacgggacgcagggggggagcaaggcatggtggcgc
gatgtgccggcgcatgaggagccggaagagctggcgtaccttgcccgggagatctatccg
aggggtaacacgagcgccgtccagatcatgcgttgcgacgcctacgcgcgtttctcggtg
cgggagtaa

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