Geomonas oryzisoli: KP004_09305
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Entry
KP004_09305 CDS
T07282
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ger
Geomonas oryzisoli
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ger03032
]
KP004_09305
03036 Chromosome and associated proteins [BR:
ger03036
]
KP004_09305
03400 DNA repair and recombination proteins [BR:
ger03400
]
KP004_09305
DNA replication proteins [BR:
ger03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KP004_09305
Chromosome and associated proteins [BR:
ger03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
KP004_09305
DNA repair and recombination proteins [BR:
ger03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
KP004_09305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QWV95345
LinkDB
All DBs
Position
2101248..2101523
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSELIESLAAKKTLSFKKAEEVVNAVFASMTEALLSGDRIEIRGFGSFVVKEYDAYTG
RNPKTGESISVKAKKLPFFKVGKELKEKVSG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatcagaactcattgaatctctcgcagctaaaaagaccctctccttcaagaag
gcggaggaagtcgtcaacgccgtcttcgcatcgatgaccgaggccctgctctccggcgac
cggatagaaatcaggggctttggcagcttcgtagtgaaggagtacgacgcctataccggc
aggaaccccaaaacgggtgaatcgatctcggtcaaggcgaagaagttgcccttcttcaag
gtcggtaaggagctgaaggagaaggtctccggctga
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integrated database retrieval system
