Geomonas oryzisoli: KP004_09565
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Entry
KP004_09565 CDS
T07282
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
ger
Geomonas oryzisoli
Pathway
ger03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KP004_09565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ger03400
]
KP004_09565
Enzymes [BR:
ger01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
KP004_09565
DNA repair and recombination proteins [BR:
ger03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KP004_09565
Prokaryotic type
KP004_09565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
QWV95396
LinkDB
All DBs
Position
2168466..2169026
Genome browser
AA seq
186 aa
AA seq
DB search
MLCLNPVPRSFYDRDTITVAHDLLGAFLVHDVAGEVRVGKIVEVEAYLGETDLAAHSSKG
LTPRTRILFGPPGFAYVYLIYGMYFCMNVVTEREGSACAVLLRALEPVQNVSERTRGPGL
LCRAMGIDLHHNGQDLESRDFFIAPRDDYAPHQVVARPRIGVAYSGIWAAKPLRFYLKGN
PYISKK
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgcctgaacccggtgccgcgttccttctacgaccgcgacaccatcaccgtcgca
catgatctcctgggggcgttcctggtccatgatgtggccggagaggtgagggtggggaag
atcgtcgaggtggaagcatatctcggcgagaccgacctggcggcgcactcttccaagggg
ctcacgccgcgcacccgcatcctcttcggcccgcccggcttcgcctacgtctatctcatc
tacgggatgtacttctgcatgaacgtggtgaccgagcgggaaggaagcgcctgcgcggtg
cttctgcgcgccctggaaccggtgcaaaacgtgagcgagcgcacccggggcccggggctt
ctctgccgcgccatgggaatcgacctgcaccacaacgggcaggacctcgagagcagggac
ttcttcatcgcgcccagagacgactatgcgccacaccaggtggtggcgaggccacgcatc
ggcgttgcctactccggcatctgggccgcaaagccgcttcgtttctacctcaaagggaac
ccttacatttcgaagaagtag
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