Geomonas oryzisoli: KP004_09725
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Entry
KP004_09725 CDS
T07282
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
ger
Geomonas oryzisoli
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Ortholog
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GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA
AAA_2
HTH_50
bpMoxR
AAA_16
MCM
HTH_30
AAA_3
HTH_28
Pre_tape_measure
AAA_7
TIP49
YuzC
Motif
Other DBs
NCBI-ProteinID:
QWV95425
UniProt:
A0ABX8JAF5
LinkDB
All DBs
Position
complement(2214357..2215706)
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AA seq
449 aa
AA seq
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MKGSVLVVEDDETFRAFVQTILQDEGYQVECAADGAKALRLLRQTGFDVVVSDLKLPGKS
GLDLFRETRPDPGAPPFIFLTAFGTVDEAVCAIKEGAVDFLTKPLQDPQALLTLVQRTIE
TQGRARDYLSLKESEIAGLPPEELLFAGDAMRVVRQLVHDVAVTMANVLIFGESGTGKEL
VARTIHLMSPRSKAAFIAINCAAIPENLLESELFGHEKGAFTGAVQARQGKFELAKGGTI
FLDEIGEMPLSLQAKLLRVIQERSFERVGGTREIKADVRIVAATNRNLRDEVAERRFRED
LYYRLNVFPLQLPPLRERTDAIASLAEYFMHRFSSQLGKTLKGIEHEALSALRRYHWPGN
VRELQNVMERAVILAKDLVRARTLPDEIMTSAQVGQLDSRERLKGAERDLIAQAIAKHGG
NRRLAAGELGISRRSLQYKLKEYGFLDEG
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaagggatcagtgctggttgttgaggatgacgagacctttcgagccttcgtgcagacc
attttgcaggacgaagggtaccaggtggaatgcgcagccgacggcgccaaggcgttgcgc
ctgttgcgccagaccggcttcgacgtggtggtgtccgacctgaagctacccggaaagagc
gggcttgacctgttccgggagacgcggcccgatcccggtgcgccccccttcatcttcctc
accgccttcggcaccgttgatgaagccgtctgcgccatcaaggagggggcggtggacttc
ctgaccaaaccgcttcaggatccccaggcgctgctcaccctggtgcaacggaccatcgag
acgcaggggcgcgcccgtgactacctctccctgaaggagtccgagatcgccggactgccg
ccggaggaactgctgttcgccggcgacgccatgcgcgtggtgcggcaactggttcacgat
gtggcggtcactatggccaacgtgctgatctttggcgaaagcggcaccggcaaggaactg
gtggcacggaccatccacctgatgagcccgagaagcaaggctgcctttatcgccataaac
tgcgccgccattccggaaaacctcttggaaagcgagctgttcggccacgagaagggggcc
tttaccggtgccgtacaggcgcgccagggcaagttcgagctggccaaggggggcaccatc
ttcctggacgaaataggcgagatgccgctttccctccaggccaaactgctgcgcgtcatc
caggagcggtccttcgagagggtgggggggacccgggagataaaggccgatgtccgcatc
gtcgccgcgaccaaccgcaacctgcgcgatgaagtcgccgagcggcgcttccgcgaagat
ctctactaccggcttaacgtcttcccgctgcaactgccaccgcttcgggaaaggactgat
gccatcgctagtttggctgaatacttcatgcatcgcttcagctcgcagctgggcaagacg
ctgaaggggatcgagcacgaggcgctgtccgctctgcgtcgttatcattggccaggcaac
gtccgcgagctgcaaaacgtgatggaaagggcggtgatcctcgccaaggacctggtccgg
gcacgaacgcttccggacgagatcatgacctccgcccaggtggggcaactggacagccgg
gagcgcctgaaaggagcggagcgcgacctgatcgcgcaggcgatcgcgaaacatggcggc
aaccgccgcctcgcagcaggggagctcggcatctcccggcgctcgttgcagtacaaactg
aaggagtatggcttcctggatgagggatga
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