KEGG   Geomonas oryzisoli: KP004_12285
Entry
KP004_12285       CDS       T07282                                 
Symbol
nifS
Name
(GenBank) cysteine desulfurase NifS
  KO
K04487  cysteine desulfurase [EC:2.8.1.7]
Organism
ger  Geomonas oryzisoli
Pathway
ger00730  Thiamine metabolism
ger01100  Metabolic pathways
ger01240  Biosynthesis of cofactors
ger04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:ger00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    KP004_12285 (nifS)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    KP004_12285 (nifS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ger03016]
    KP004_12285 (nifS)
   03029 Mitochondrial biogenesis [BR:ger03029]
    KP004_12285 (nifS)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ger02048]
    KP004_12285 (nifS)
Enzymes [BR:ger01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.7  cysteine desulfurase
     KP004_12285 (nifS)
Transfer RNA biogenesis [BR:ger03016]
 Eukaryotic type
  tRNA modification factors
   Thiolation factors
    KP004_12285 (nifS)
 Prokaryotic type
    KP004_12285 (nifS)
Mitochondrial biogenesis [BR:ger03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Proteins involved in Fe-S cluster biogenesis
    KP004_12285 (nifS)
Prokaryotic defense system [BR:ger02048]
 DNA phosphothiolation system
  Sulfur modification proteins
   KP004_12285 (nifS)
SSDB
Motif
Pfam: Aminotran_5 Aminotran_1_2 Beta_elim_lyase DegT_DnrJ_EryC1 Cys_Met_Meta_PP Aminotran_3
Other DBs
NCBI-ProteinID: QWV92002
UniProt: A0ABX8J4W8
LinkDB
Position
complement(2810472..2811641)
AA seq 389 aa
MREIYLDNNATTKVDERVFEEMRPYFCELYGNPSSMHFFGGQVQKKVDEARARVASLLGA
LPDEIVFTACGTESDNAAIRSALEVFPEKRHIITSRVEHPAVLTQCRNLSKRGYRVTELN
VDGNGQLDLSELERLVDEDTAIVSLMYANNETGVIFPIEEAAKIVKKKGALFHTDAVQAV
GKIPLNMAESAIDMLSLSGHKLHAPKGVGVLYVRRGTPFRPMLVGGHQERGRRAGTENTA
SIIAMGKACQLAEQYMADEAGRVREMRDRLERELTALIPNTRINGGGTERLPNTLSIAME
FVEGEGILLLLSEKGICASSGSACTSGSLEPSHVLRAMGVPFTCAHGSIRFSLSRFTTDD
DIDAVIEALPPIISRLRAMSPFGREFLNK
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgagagagatctatcttgacaacaacgccaccaccaaggtggacgagcgggttttcgag
gagatgcgtccctacttctgcgagctgtatggcaacccgagttccatgcacttcttcggt
gggcaggtgcaaaagaaggtcgatgaagcccgcgcccgcgtcgcctcgcttctgggcgcc
ctgccggacgagatcgttttcaccgcttgcggcaccgagagcgacaacgccgccatccgt
tcggcgctggaagtcttcccggagaagcgtcacatcatcaccagccgcgtcgagcacccg
gcggtgctgacccagtgccgcaacctctccaagcgcggctaccgtgtgaccgaattgaac
gtggacggtaacgggcaactcgacctgagcgaactggagcggctggtcgacgaagatacc
gcgatcgtctcgctcatgtacgccaacaacgagaccggcgtcatcttcccgatcgaagaa
gccgccaagatcgtcaagaagaagggtgctctgttccacaccgacgcggtgcaggcggta
ggaaagattccgctgaacatggctgaatccgccatcgacatgctctccctgtccgggcac
aagctgcacgcccccaagggcgtcggtgttctctatgtgcgtcgcggcaccccgttccgc
ccgatgctggtcggcgggcaccaggagcgcggccgcagggccggcaccgagaacaccgct
tccatcatcgccatgggcaaggcctgtcagctggccgagcagtacatggcggatgaggcc
gggcgcgtgcgcgagatgcgcgaccgtctggagcgtgaactgaccgcgctgatcccgaac
accaggatcaacggcggcggcaccgagcgtctgcccaacaccctctccatcgccatggag
ttcgtggaaggggaggggatcctgctgctgctctccgagaaggggatctgcgcctcttcc
ggcagcgcctgcacctccggttccctggagccgtcgcacgtgctgcgcgccatgggcgtt
ccctttacctgcgctcacggttccatccgcttctcgctgtccaggttcaccaccgatgac
gacatcgatgcggtaatcgaagcgttgccgcccatcatctcccgcctgcgcgcgatgtcg
ccgtttgggcgcgagttcttgaacaagtag

DBGET integrated database retrieval system