Geomonas oryzisoli: KP004_12450
Help
Entry
KP004_12450 CDS
T07282
Name
(GenBank) pilus assembly protein PilY
KO
K02674
type IV pilus assembly protein PilY1
Organism
ger
Geomonas oryzisoli
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ger02044
]
KP004_12450
02035 Bacterial motility proteins [BR:
ger02035
]
KP004_12450
Secretion system [BR:
ger02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
KP004_12450
Bacterial motility proteins [BR:
ger02035
]
Pilus system
Pilus assembly proteins
KP004_12450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ntox25
Motif
Other DBs
NCBI-ProteinID:
QWV92034
LinkDB
All DBs
Position
complement(2842499..2847421)
Genome browser
AA seq
1640 aa
AA seq
DB search
MAKSMNRLLKKTLGVLALGAMLAPGAALAADPGDNWCITPPFISGGIKPNLLLMIDNSAS
MYDMGYIAGSTSTPPSYTCGTGSSSATVTSSYCFDNTYSNTQDYEGYFSKYDAATNTVSY
PDYQFTGGKFVEISTGVPTSGGTYRTSYLYILMAGDASATPSTRKVDTFIANGRFLNWLS
ASKFDIEKKILTGGRYDAANAILKGESRGCVGRRFVKVVPAIPTLSFAVRGSTAVEGFYD
PSTQGGDTRIEIFEGTYNQSACQCAVYNWANGNYGQASTNTTDCLGVTPSDNALATLNHA
QQTCYQLKKNIQGLQAAGVALTSITDTQLWQGINIQDIKTACTNVYGDNKNPMPPSSITN
ESSGNYICTSAATHSNVVAPYNVNGANTTGFVGSCWNGSTDKFTGNDSCVKEETLHYCMG
VNFAEVTDPSGTIPTSGNIPSVIMDAGVRALGSPLGPTSGGKCSLKANACSADADCLKVC
SNNFSLNCTADTDCSSSGVCVSQNCNNSFPVKVGVSTVPSGVINDFSAGIRFGAMAFNNF
GSASEASSTSTTMPIPAFCATSGKMCTIGGTDCSSSDGTCTAVTNKDGGYLDPNSFIGSS
IGDHSTGLISFIDGIPAKTWTPFAEAYYNAIAYFVKDAAATTPTLNATKFTPTTAAIQAP
LPSTQDSYSNVNPIQFRCQQNNILLITDGSSTADQNGTMTAKVTDASNYFRDPNTLTESG
STSGVCGSYAGSPYLHDLSYFAYHRNIFDPSQICHGTGATSCENAQTIKTHIVYNAPSST
NSTSVCDAYNQMNMTATNGGTTMKNPNNPAQLRSDLKDTLESIAAGASSGTAASILSNSE
GSGANILQAVFYPKKVFADQTEANWIGEMQNLWYFVDPQINRSTIREDTDQNNVFDLIQD
KVVSFRFDSTDNTTYAWVSQDLNGDGSGDTAEVKVDADAVKSIWRAGKKLWARPLTGTGA
RPRNIKTSINGTSLIDFSSSTFPVVGATGNAATLAPYLDVADEATATKLINYVHGVDQTG
YRPRTVSIKETPTSTSVSGVWRLGDIISSTPRIQSNLKLNTYNMQAPSGYSDSSYDTYVG
SEDYKNRGMVYVGANDGMLHAFNFGKLNVTATGTQKATLQKLASTDPALGEEMWAYIPKQ
ALPYLKYYADVNYNHLYYIDGSTVLFDASIGAPSGVAGCTDATYYNCDKLNAVVDGSNNI
DSSKNPWRSILIGGMGIGGASSASCTDPATNNCVPTPRMDPVETTKGLGFSSYFALDVSD
PKNPSLLWEFKNDNLGFATTGPAIVRVGPKGKNGRWFAVFGSGPTGPIDTSGNQFQGRSN
QRLKFFVVDLKTGLLVGDPLDGGVDNAFAGSMIGGSIDADRWDPYAVGNYQDDAILVGFT
KKVGTGTSATWTDGGVIRIVTKNDTNPANWQVSKVVDGVGPVVTAISRLQDRKNMNLWYY
FGTGRYYYRAGNSIDDYSSQRSIYGLKDPCYNTSAVPGNKIDPNCSTTISNSDITDQSTT
ISTSIGSGGWTIGLDASTTAYGAERVVSDAVTLTNGTVFVTTFEPTSDACGFGGNSFLWA
LGYNTGGRPSDAALSGKALIQLSTGEFKEVDLAQAFGSGASRQMRRSSTPMTGKPPADAF
PVVSKSANKPVKKILHIQER
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagtatgaacaggctcttgaagaagaccttaggtgtgctggccctgggcgct
atgcttgctcccggcgctgcgctggccgccgatcccggtgacaactggtgcatcacgccg
ccgttcatctcgggcgggatcaagcccaacctgctcctcatgatcgacaactccgcaagt
atgtacgatatgggctatatagcgggatcgacctcgacgcccccgtcctatacctgcggc
accggctccagttcggcgaccgtcacctcgtcctactgcttcgacaacacctacagcaac
acccaggactacgaggggtatttcagcaagtacgatgcggccaccaacacggtgagttac
cccgactaccagtttaccggcgggaagttcgtggaaatcagcaccggcgttcccacaagc
ggcgggacctaccgcaccagctacctctacatcctgatggccggcgatgccagcgccacc
ccgtccaccaggaaggtcgacaccttcatcgccaacggcaggttcctcaactggctgtcc
gcctccaagttcgacatcgagaagaagatcctcaccggcggtcggtacgacgcggccaac
gccattctcaagggagagtccagggggtgcgtggggcggcgtttcgtcaaggtcgttccc
gccattcccaccctctcctttgccgtcagggggtcgaccgcggtcgagggtttctacgac
ccgagcacccagggtggcgacaccaggatcgagatcttcgaggggacctacaaccagtcg
gcctgccagtgtgccgtctacaactgggccaacggcaactacggccaggcgagcaccaac
accacggactgcctgggtgtcacgccttcggataacgcccttgccaccttgaatcacgcc
caacagacctgttaccagctcaagaagaacatccaggggctgcaggccgcaggggtcgcc
ctcaccagcatcaccgatacccagctgtggcagggcatcaacatccaggacatcaagacg
gcctgcaccaacgtctacggcgacaacaagaacccgatgccgccgtcttccatcaccaac
gagtcgagcggcaactacatctgcaccagcgccgccacccactccaacgtggtcgcaccg
tacaacgtcaacggcgccaacaccaccggctttgtcgggagctgctggaacggctccacg
gacaagttcaccggcaacgacagctgcgtgaaggaggaaaccctgcactactgcatgggc
gtcaacttcgcggaggtgaccgacccctcgggcaccatccccaccagcggcaacatccca
tccgtcatcatggatgcgggcgtgagggcgctcggctctcccctggggccgaccagcggc
gggaaatgctccctcaaggccaatgcctgctccgcggacgccgactgcctcaaggtctgc
tccaacaatttcagcctgaactgcaccgcagacaccgactgcagctcctccggcgtctgc
gtgtcgcaaaactgcaacaactccttccccgtcaaggtgggggtctcaacggtgcccagc
ggcgtcatcaacgatttctccgcgggaatccgtttcggggccatggccttcaacaacttc
ggttcggccagcgaggccagctctacctccacgaccatgcccatccccgccttctgcgcg
actagcggcaagatgtgcaccataggggggacggactgctcctcctccgacggtacctgc
acggccgtgaccaacaaggatggggggtacctggatccaaactccttcatcggctccagc
atcggtgaccacagcaccgggctcatcagcttcatcgacggcatccctgccaagacctgg
acccccttcgccgaggcctactacaacgccatcgcctatttcgtaaaggatgccgccgcg
actacgccgaccctcaacgccacgaaattcaccccgacgaccgcggcgatccaggcgccg
ctgcccagcacccaggacagctacagcaacgtgaacccgatccagttccggtgccagcag
aacaacatcctgctgatcacggacggctcttccactgctgaccagaacggcaccatgaca
gccaaggtgaccgatgcgtccaactatttcagggatcccaacaccctgaccgagagcggc
tccacctcaggcgtctgcggaagctacgcgggcagcccgtacctgcatgatttgagctac
ttcgcctatcaccgcaacatcttcgaccccagtcagatctgccacggaaccggcgccacc
agctgcgagaacgcccagaccataaagacccatatagtctacaatgccccctccagtacc
aactcgaccagcgtgtgcgacgcctacaaccagatgaacatgacggcgaccaacggcggc
accacgatgaaaaacccgaacaacccggcacagcttagaagcgacctcaaggacaccctg
gaaagcatcgctgcgggcgcgtcctccggtaccgcggcctccatcctcagtaactccgag
ggtagcggcgccaacatcctgcaggccgtgttctatccgaagaaggtcttcgcggaccag
accgaggccaactggatcggcgagatgcagaatctctggtatttcgtcgacccgcagatc
aaccgctccacgatcagggaggacaccgaccaaaacaacgtcttcgacctgatccaggac
aaggtggtcagcttccgcttcgacagcacggacaacaccacctacgcctgggtctcccag
gatctcaacggcgacggctccggcgataccgcagaggtgaaggtcgatgccgacgcggtg
aagagcatctggcgggcgggcaagaaactctgggcgcgtccactcaccggtaccggcgcc
agaccgcgcaacatcaagaccagcatcaacggcacgtcgctcatcgatttctcctcctcc
accttcccggtggtgggggcaacgggcaacgcggcaacactggcgccctatctcgatgtc
gccgatgaggcgaccgccaccaaactgatcaactacgtgcacggagtggatcaaaccggt
taccggcccaggaccgtttccatcaaggaaacccccaccagtacctcggtttcgggtgtg
tggcgcctgggggacatcatctcctcgacgccgcggatccagtccaacctcaagctgaac
acctacaacatgcaggcccccagcggctacagtgacagctcgtacgacacctacgtcggg
tccgaggattacaaaaaccggggcatggtgtacgtcggcgccaacgacggcatgctgcac
gccttcaacttcggcaagctcaacgtgaccgcgaccggtacccagaaggcgacgctgcaa
aagctcgcgagcaccgacccggcgcttggggaggagatgtgggcctacatcccgaaacag
gcgctgccgtaccttaagtactacgccgatgtgaactataaccatctctactacatcgac
ggcagcaccgtgctcttcgatgccagcatcggcgcccccagcggcgtcgccggctgcacc
gacgcgacctactacaactgcgacaagctgaatgccgtggtggacggcagcaacaacatc
gacagctccaagaacccctggcgcagcatcctgatcggcggcatgggcatcggcggggcg
tcctcggccagttgcaccgaccccgcgaccaacaactgcgtgccgactccccgcatggat
ccggtcgaaaccaccaaggggctcggcttctcctcctatttcgcactggacgtgagcgac
cccaagaacccgtccctgctttgggagttcaaaaacgacaacctcggtttcgccaccacc
ggcccggccatcgtcagggtcggccccaagggcaagaacgggcgctggttcgctgtcttc
ggctccggccccaccggcccgatcgacaccagcggcaaccagttccaggggcgctccaac
cagcggctcaagttcttcgtagtcgacctgaagactggtctcctcgtgggtgacccgctc
gacggcggagtcgacaatgcgtttgccggttccatgatcggcgggtcgatcgatgccgat
cgttgggacccgtacgccgtcggcaactaccaggacgacgccatcctggtcggcttcacc
aagaaagtcggtaccggcacctccgctacctggaccgatggcggagtgatcaggatcgtc
accaagaacgacacgaaccccgccaactggcaggtgagcaaggtggttgacggcgtcgga
ccggtggtcaccgcgatatccaggctgcaggaccgaaagaacatgaacctctggtactac
ttcggtaccggcaggtactactatcgtgccgggaactccatcgacgactacagctcgcag
cgctcgatctacggcctgaaggacccctgctacaacacctccgccgttcccggtaacaag
atcgacccgaactgcagcaccaccatcagtaactccgatatcacggaccagtccaccacc
atctccaccagcatcggcagcggtggctggacgatcggcctcgacgcctcgacgacggcc
tatggtgccgaacgtgtggtctccgacgccgtcaccctcaccaacggcacggtctttgtg
accaccttcgagcccacctccgacgcctgcgggttcggcggcaactccttcctgtgggcg
ctgggctacaacaccggcggcaggccgagcgatgcggctctctccgggaaggcgctcatt
cagctctccacgggtgaattcaaggaggtcgacttggcccaggcgttcggcagcggcgcc
tcgcgtcagatgcggcgcagctcgacgccgatgaccggtaagccgccggctgacgccttc
cccgtcgtcagcaaaagcgccaacaagcccgtgaagaagatcctccacatccaggagcgc
taa
DBGET
integrated database retrieval system
