Geomonas oryzisoli: KP004_13200
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Entry
KP004_13200 CDS
T07282
Name
(GenBank) pilus assembly protein PilY
KO
K02674
type IV pilus assembly protein PilY1
Organism
ger
Geomonas oryzisoli
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ger02044
]
KP004_13200
02035 Bacterial motility proteins [BR:
ger02035
]
KP004_13200
Secretion system [BR:
ger02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
KP004_13200
Bacterial motility proteins [BR:
ger02035
]
Pilus system
Pilus assembly proteins
KP004_13200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
KdgM
Motif
Other DBs
NCBI-ProteinID:
QWV92176
LinkDB
All DBs
Position
complement(3025311..3029948)
Genome browser
AA seq
1545 aa
AA seq
DB search
MGTFRVPASVHAGVLVFCLIVFIVFTAAHQAQADAAAEMQAYCSVPPLTGVKPNLLLLLD
NSASMYDLAYTNPQTFCLDDSFNPAAEYPGYFEAATVYQYSTVTDRFVAAPGASIESSTC
NQARAAYLCVNLNNNSKKLDNFLATGKFLNWLAMSKQDLEKLALTGGKYIIPPSGNPDTG
FLQAESRGCQGKRYVKIVNDASGTPLPVTFGVRGPIPSESGYVQQANHGGPSRIDVYPAR
YNTSECLLAVRKWQEGAPASEVANAAASCMGKLEDPVGVPTAGKVFAEIMSYCYKYLAGT
EILYTDLSKDLLLDCRKRTLFFYSGDASKIPKNVGDDVCGKELFHNLLFHDGAPTIQGYL
GQCYAQGFPEGCSVNQTKDFCAEVEKPWLIDPSANAAQAATNSSLPSFILDAGITNLGKV
AATLQVRVASAAAPTGLIQQFADDINFGAMVFNDNGAGSECGAVIPCVKHCSSDPVPRRE
CYVDGDCGSGTCSEDTRNDGGRIISYLNYGEIGNHDKGLIAAVDAIRGTSWTPLAEAFYE
AIGYFGEKPSFRFQSADFDPAYPPSRYTCQRNNVLVLTDGMSTADRAPAVNSYVAAAAAA
WVNPVDGMPAGLITTASTPVGSPPVNLGSYNLDDLAWIARHKNIFDPAQPVARHKDYITT
HVIYTGPPCGDPGSRAGYDSEGSCTTSDEGKPEKLMQLAAAKGGGSINSVYNPAGLQGAL
AKVFLQIAGGFNTGTSSSLLATGEGNGALFLQPQFYPHKSFDGGKTSGIWMGELQALWYY
IDNFMGGGSGSASRIREDTQQRKTLDLELDRVVEFVVEDPVLQESRARLLVDADGDGNAD
SVQPAGYPLTVLPEAVHSLWRAGRQLWERSPVTRTIYTQTGGTSLVPLLDTSTAVNRQLL
LARDQAEANQIVAFVKGSDDTHGGSGGATRDRSLTAYGGSEKKVWKLGDIISSTPALQSA
APLGSYHLSAPVGYGDPSYRKFVDVRGAYAGRGTVYAGANDGMLHAFRLGQSRVHPVDQE
VWPGTRKAVLDGTDLGKEEWGFVPKNALPYLRYLKEPLYLHLYYVDGAVTLLDASIGDPA
LCSRDGYWNCTRDNSTGSNWRTVLIGGMGLGGASRLPDGPACDEGASATCVKAPAAGVGG
LSSYFALDVTTQAADGTGTPRFLWEFSHPNLGFATSGAAIIRVNARTINAQNQQISDRDK
NGRWFAVFASGPTGAVDRKTRQFTAVSDQNLKLFVVDLNAVPPLTQGGNYWVIDTGIPNA
FGGSMAGAGIDADKWSPSSAGNYEDDALYVGYTRAAAGGGWTGGVLRLFTGEDPDPAKWK
ASIVIDDTGPVTGAIGKLQDRQYKRLWLYFGAGRYFNRQDDLSAARSLYGVREPCYDAER
NTFRKDDEEVASCSGQPVLRSDLVDVTDVVRVVQPRDQGSNYRGWRIDLDAASGTLGSER
SVDSPSTLTGGVVFFTTYRPSLEPCQEGLSYLWGVHYSTGGPARSVSAQALMPLSNGGIP
TLDAGGLSDRDNRRSPPRTGKGVKPRLVTNSGLKPLRKIIHIQER
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgtttagagtgccggcctccgtgcacgccggcgtccttgttttttgcctgata
gtcttcatcgtgtttactgcagcgcaccaggcccaagccgacgcggccgcggagatgcag
gcctactgcagtgtccctccgcttaccggggtgaagcccaacctgcttcttttgctggat
aactccgccagcatgtacgaccttgcctacaccaacccacagaccttctgtcttgacgac
agtttcaaccccgcagccgaatacccgggttatttcgaggcggccacggtctatcaatat
tccacggtcaccgaccgcttcgtggccgcgcccggggccagcatcgagagcagcacctgc
aaccaggcgagggccgcctatctctgtgtcaacctcaacaacaacagcaagaaactcgac
aacttcctcgccaccggcaagttcctcaactggctcgccatgagcaagcaggacctggaa
aagctggccctgaccggcggcaagtacatcatccctcccagcggcaaccccgacaccggc
ttcctgcaggcggaatcgcgcggttgccaggggaagcgctacgtgaagatcgtcaacgac
gccagcggtacccctctcccggtcaccttcggggtgcgcggcccgatcccttccgagtcc
ggttacgttcagcaggcgaaccacggcggcccgagcaggatcgacgtctatcctgccaga
tacaacaccagtgagtgcctcttggcggtgcggaagtggcaggagggggcacctgccagc
gaggtggccaacgccgctgccagctgcatggggaaactggaggacccggtcggagtaccg
accgccggaaaggtcttcgcggagatcatgagctactgctacaagtacctggccggcacc
gagatcctttacaccgacctgtccaaggacctgctgctcgactgccgcaaacgcaccctc
tttttctacagtggtgacgcaagcaagatacccaaaaacgtgggggacgacgtctgcggc
aaagagcttttccacaacctgctgtttcatgacggcgccccgaccatccaaggctatctc
gggcaatgctacgcccaggggttcccggagggatgctcggtcaaccagaccaaggatttt
tgtgcagaggtggagaagccgtggctgatcgatccctcggccaacgccgcccaggcggcc
accaactcaagcctcccgtccttcatcctggacgcggggatcaccaacctcggcaaggtc
gcggcaacgctccaggtacgcgtcgcatcggccgcggcaccgacggggctgatccagcag
ttcgccgacgacatcaacttcggcgccatggtcttcaacgacaacggggccggctccgag
tgcggtgctgtcatcccctgcgtgaagcactgcagcagcgatcccgtcccccgcagggag
tgctacgtcgacggcgactgcggctcggggacctgcagcgaggacacccgcaacgacggc
ggcaggatcatctcttacctcaactacggggagatcggcaaccatgacaagggactcatc
gcagccgtcgacgccatcagggggacgtcctggacgccgctggccgaggctttctacgag
gcgatcgggtactttggcgaaaaaccatccttccgtttccagtccgccgacttcgatccc
gcctacccaccgtcgaggtacacctgccaaagaaacaacgtcctcgtcctcaccgacggc
atgtctacggcggaccgtgcccctgcggttaacagttatgtggcagcggcggcagcagcc
tgggtgaatcccgtcgacggcatgcccgccggcctcatcaccaccgcgagcacccccgtc
ggctctccccccgtgaacctgggtagttacaacctggacgacctggcctggatcgcccgg
cacaagaacatcttcgatcctgcccagcccgtagcgcggcacaaggattacatcaccacc
catgtcatctataccggtcccccctgcggcgatcccggcagccgggcaggctacgacagc
gaagggagttgcaccacctcggacgagggaaaaccggagaagctgatgcagttggccgcg
gccaaagggggaggcagcatcaacagtgtctacaaccccgccggcctgcagggggccctc
gccaaggtcttcctccagatcgccggaggcttcaacaccggcaccagcagttcgttactg
gcaaccggggagggaaacggtgccctgttcctgcagccgcagttttatccgcacaagagt
ttcgacggcggcaaaacgtccgggatctggatgggagaattgcaggcgctctggtactac
atcgacaacttcatgggcggcggcagcgggtcggcaagccgcatcagggaggatacccag
cagagaaagaccctggatctggaactggaccgggtggtggagttcgtcgtggaggatcct
gtcttgcaggaaagtcgcgccaggctcctcgtcgatgcggatggcgacggcaacgcagac
tcggtccagccggcgggatacccgctgacggtcctgccggaggcggtgcacagcctgtgg
cgagcggggcgccagctctgggaacgatcccccgttaccaggaccatctacacccagacc
ggcggcacgtccctggttcccctcctcgacacctccactgcggtgaaccgccagttgctc
ctggcgcgggaccaggcggaggcgaaccagatcgtggccttcgtgaaaggcagcgacgac
acccacggcggcagcggtggcgccaccagggatcgcagcctcacggcctatggcgggtcg
gagaaaaaggtctggaagctcggcgacatcatctcctcgacaccggcactgcagtcggct
gcccccctggggagctatcacctctcggcgccggtcggctacggcgacccctcgtaccgc
aaattcgtcgatgtccgtggggcgtacgccggccgcggcaccgtgtatgccggggcaaac
gacgggatgctgcatgccttcaggctgggacaaagccgggtgcacccggtcgaccaggag
gtctggcccggcacccggaaggctgttctggacgggaccgatctcggcaaggaggagtgg
ggcttcgtccccaagaacgcgcttccttacctcaggtacctgaaggagcccctctacctg
cacctttactacgtcgacggcgccgtcaccctgctcgacgcaagcatcggcgaccccgcc
ctctgcagccgcgatgggtactggaactgcaccagggacaacagcaccgggagcaactgg
cgtacggtcctgatcggcggcatgggacttggtggcgccagcaggctccccgacggcccc
gcctgcgacgagggcgcctcggcgacctgcgtcaaggccccggctgccggcgtcggtggt
ctctcctcctacttcgcactggatgtcactacccaggcggccgatggcaccggtaccccc
aggttcctgtgggagttctcccacccgaacttgggctttgccacctccggcgctgccata
atccgcgtcaacgcgcgcaccatcaacgctcaaaatcagcagatttccgatcgcgacaag
aacgggcgctggttcgccgttttcgcctcggggccaaccggagccgtcgacaggaaaacg
cgccagttcaccgcggtctccgatcagaacctgaagctgttcgtggtggacctgaacgcc
gtgccgccgctcacccaggggggcaactactgggtcatcgacaccggcattcccaacgcc
ttcggcggcagcatggccggcgcggggatcgatgccgacaagtggagcccatcatcggcg
gggaattacgaggacgatgcgctgtacgtcggttataccagggcggctgcggggggaggg
tggaccggcggggtcctgaggctgtttaccggggaggacccagaccccgccaaatggaag
gcgagcatagtcatagacgacaccggtccggtcaccggtgccatcggcaaactccaggac
cggcagtacaagcgcctgtggctctatttcggagcggggaggtacttcaacaggcaggac
gacctctcggctgcgcgttcgctctacggtgtccgcgagccatgctacgacgccgagcgc
aataccttccgcaaggacgacgaagaagtggcttcctgcagcggccagccggtgctccgg
tccgatttggtcgacgtcaccgacgttgtgcgggtggtgcagcccagggaccaggggagt
aactaccggggatggcgcatcgacctcgatgcggcctcgggcacccttggcagcgagcgc
tctgttgacagcccgagcaccctcaccgggggtgtcgtcttcttcaccacctaccggcct
tccctggagccctgccaggaagggctatcctacctgtggggggtgcattacagcaccggc
ggtccggctaggtcggtgtctgcccaggccctgatgccgctctccaacggcggcatccct
accttggacgcgggggggctgagcgaccgcgacaaccggcgcagccctccccggaccgga
aagggggtgaagccccgactggtcaccaacagcggactaaagccgttgcggaagatcatc
cacatacaggagcgctaa
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