Geomonas oryzisoli: KP004_13360
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Entry
KP004_13360 CDS
T07282
Name
(GenBank) UvrD-helicase domain-containing protein
Organism
ger
Geomonas oryzisoli
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
DEAD
AAA_11
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
QWV92204
UniProt:
A0ABX8J3T6
LinkDB
All DBs
Position
complement(3065693..3067729)
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AA seq
678 aa
AA seq
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MLDLSRLNPEQLAAVKHTEGPLLVLAGAGSGKTGVITYRIAHLILNKQVSPDQILAVTFT
NKAAKEMKERVEHLVGRKASKGIVLSTFHSLGVRVLKRDIERLGYKKNFSIYSTADQVGL
VRQIVREVNTDSKKYDAESIIWRISGAKNKLIPPERFAPNPLDDIDMMAALVYPRYQSAL
KAFNAIDFDDIIMLTAELLQHHPPVLKHWQDRFRYIMVDEYQDTNSSQYLLVNHLAAGCK
NLCVVGDDDQSIYGWRGADVGNILDFEKDFKGCRTIKLEQNYRSTGNILEAANSVIGNNK
IRKAKRLWTASGQGALIDLCIVQDDEEEATSVVERIQLERFKKDTPYSDFAILYRTNAQS
RAFEEQLRFEDIPYVLVGGTQFFERKEVKDSLSYLKVIANPLDEVALLRIVNFPRRGIGD
STVIRINQWSLEKEIPLFEAISRVGEIEGISEAIRDKVLSFHHTLLDAADAFRAEGGLAE
KGKALFEKLKIEEEIFRTIDDQKAARRKVENVEQIINSMAAYEERVPQATLGGFIEKVSL
MDEDRFSGKDKKDHGKDAVTLMSLHSSKGLEFPFVFLVGMEDEILPHKRAIYEDDSIDEE
RRLCYVGITRARQQLVMTRTLFRKKYGKMEERVPSRFLEEIPGTVLNVQQTGVAKEVTPE
EAEKTAEDFFAKMKAMMG
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacctgtcccgtctcaatcccgaacaactcgccgccgtcaagcacacggaaggc
cccctgctggtccttgccggcgccgggtccggcaagaccggggtgatcacctatcgcata
gcgcacctgatcctgaataagcaggtgtcgccggaccagattctcgccgtcaccttcacc
aacaaggcggccaaggagatgaaggagcgggtggagcacctggtggggcgcaaggcgtcg
aaggggatcgtgctttccacgttccattccctgggggtccgcgtgctcaagcgcgacatc
gagcgcctgggctacaagaagaacttctccatctactcgacggccgaccaggtggggctc
gtgcgccagatcgtgcgtgaggtgaacaccgacagcaagaaatatgacgcggagagcatc
atctggcgcatctcaggcgccaagaacaagctgatcccgccggagcgcttcgcacccaac
ccgctggacgacatcgacatgatggccgccttggtctacccgcgctaccagtccgctctg
aaagccttcaacgccatcgatttcgacgacatcatcatgctcacggcggaactgttgcag
caccacccgccggtcctcaagcactggcaggaccgcttcagatacatcatggttgacgag
taccaggacaccaactcgtcccagtatctcctggtgaatcacctggccgccggctgcaaa
aacctttgcgtagtgggggacgacgaccagtccatctacggctggcgcggcgcggacgtc
ggcaacatcctcgacttcgagaaggacttcaaggggtgccgcaccataaagctggagcag
aactaccgctccaccgggaacatcctggaagccgccaacagcgtcatcggcaacaacaag
atacggaaggcgaaaaggctgtggaccgcgtcggggcagggggcgctcatcgatctctgt
atcgtgcaggacgacgaggaggaggcaacctccgtggtggagcgcatccagttggagcgc
ttcaagaaggacaccccctacagcgacttcgccatcctgtaccgcaccaacgcgcagagc
cgcgccttcgaggagcagctccgcttcgaggatatcccctacgtactggtgggcggcacg
cagttcttcgagcgcaaggaggtcaaggattccctctcctacctgaaggtgatcgccaac
cccctggacgaggtggccctgttgcgcatcgtcaacttccccaggcgcggcatcggcgac
agcacggtgatccgcatcaaccagtggtcgctggaaaaggagatccccctgttcgaggca
atcagccgggtaggggagatcgaagggatctccgaggcgatccgggacaaggtgctttcc
tttcaccacaccctgctcgacgccgccgacgcgttccgggccgaaggtgggctggccgag
aaagggaaggcgctcttcgagaagctgaagatcgaggaggagatcttccgcaccatcgac
gatcagaaggccgcgcggcgcaaggtggagaacgtggagcagatcatcaactccatggcg
gcctacgaggaacgggtgccgcaggcgacgctcggtggcttcatcgaaaaggtgtcgctc
atggacgaggaccgcttctccggcaaggacaagaaggatcacggcaaggacgctgtgacg
ctcatgtcgctgcactccagcaaggggctcgagttccccttcgtgttcctggtggggatg
gaggacgagatcctgccgcacaagagggcgatctacgaggatgacagcatcgacgaggag
cggcgcctgtgctacgtcggcatcacccgggcgcgtcagcaactggtgatgacgcgcacg
ctgttccggaagaagtacggcaagatggaggaacgggtcccgtcgcgctttttggaggag
atcccgggtacggtgctgaacgtgcagcaaaccggggtggccaaggaagtgacgccggag
gaggcggaaaagacagcggaggatttcttcgccaagatgaaggcgatgatggggtag
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