Geomonas oryzisoli: KP004_13510
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Entry
KP004_13510 CDS
T07282
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ger
Geomonas oryzisoli
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ger03016
]
KP004_13510 (truB)
Enzymes [BR:
ger01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KP004_13510 (truB)
Transfer RNA biogenesis [BR:
ger03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KP004_13510 (truB)
Prokaryotic type
KP004_13510 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QWV92231
UniProt:
A0ABX8J536
LinkDB
All DBs
Position
complement(3097428..3098315)
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AA seq
295 aa
AA seq
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MLNGFFVIDKPAGVTSHDIVSKVRRAINQKKVGHTGTLDPFATGVLPVAVGEGTKAIQFL
DESEKEYRAVLRLGIATDTQDLTGAVISEREWSHLTAEDLERLVPQFLGLQKQLPPMFSA
IKQGGVPLYKLARKGIEVEREEREVEIQSLTFEWIRLPEACFTVRCSRGTYVRTLACDIG
EALGCGAHLLELRRTRSGLFREADAISIEALAGGADQEALLMPLDRALDHLRALALTEAG
GRKVLNGVVPKPHEFVEPPGDFAQGEQVRLYLGERFAAVAEYDKLKGLRLARVFN
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacggctttttcgtgatcgacaagccggccggtgtcacctcgcatgacatcgtg
tccaaggtccgtcgcgccatcaatcagaagaaggtcgggcacaccgggaccctggatccc
tttgccaccggcgtgttgccggtcgcggtgggggaggggactaaggcgatccagttcctg
gacgagtcggagaaggagtaccgggccgtgctgcggctgggcatcgccaccgacacccag
gacctgaccggagcggtaatctccgagcgggagtggtcgcacctgacggccgaggacctg
gaacggctggtgccgcagtttctcgggctccagaagcagctgcctcccatgttttccgcc
atcaagcagggcggggtgccgctgtacaagctggccaggaaagggatcgaggtggagcgc
gaggagcgcgaggtggagatccagtcgctcaccttcgaatggatccgtcttcccgaagcc
tgcttcaccgtgcgctgctcgcgcggcacctacgtcaggacgctcgcctgcgacatcggc
gaggcgctcggctgcggcgcccatctcttggagttgcggcgcacgaggagcgggctcttc
cgcgaggccgacgccatcagcatcgaggcgctggccgggggcgccgaccaggaggcgctg
ctcatgccgctggaccgggcactcgaccacctgagggcgttggcgctcaccgaggcgggc
gggaggaaggtcttgaacggcgtggtgcccaagcctcatgaattcgttgaacctcccgga
gattttgcacagggggagcaggtgcgactctatctgggggagcgctttgcggcagtagcg
gagtacgacaagctcaaagggctgcgcctggcacgcgtattcaattag
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