Geomonas oryzisoli: KP004_13575
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Entry
KP004_13575 CDS
T07282
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ger
Geomonas oryzisoli
Pathway
ger00250
Alanine, aspartate and glutamate metabolism
ger00310
Lysine degradation
ger00350
Tyrosine metabolism
ger00650
Butanoate metabolism
ger00760
Nicotinate and nicotinamide metabolism
ger01100
Metabolic pathways
ger01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
KP004_13575 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
KP004_13575 (gabD)
00310 Lysine degradation
KP004_13575 (gabD)
00350 Tyrosine metabolism
KP004_13575 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
KP004_13575 (gabD)
Enzymes [BR:
ger01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
KP004_13575 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
KP004_13575 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
KP004_13575 (gabD)
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Motif
Pfam:
Aldedh
BsNagA_N
Motif
Other DBs
NCBI-ProteinID:
QWV92244
UniProt:
A0ABX8J6A5
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Position
complement(3113805..3115262)
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AA seq
485 aa
AA seq
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MLKLKDKGLFHQLCFINGAWTGADSGETVDVMNPATGEKLGTVPKMGGAEARRAIEAAHA
ALPSWRARTAQERSVIIRRWADLLLEHQDDLAVLMTAEQGKPLAEARGETVYAASFLEWF
AEEGKRVYGDVIPSDQAGKRIVVLKEPVGVCAAITPWNFPSAMITRKVGPALAAGCTIVV
KPATATPYSALALAVLAQRAGVPEGVFSVVTGSAAAIGGEMTGNPLVRKLTFTGSTEVGK
KLMAQCAGTVKKVSLELGGNAPFIVFDDADLDAAVEGALISKYRNTGQTCVCTNRFLVQE
GIYDRFAEKLAQSVAQLKVGDGLKGETQQGPLIDMAAVEKVEEHIGDALSKGARVVTGGN
RHALGGCFFEPTVLAGVTPEMHIAREETFGPVAPLFRFSTEEEAVRLANDTEFGLCAYFY
SRDVTRVWRVAEAIESGIIGINTGLISTVVAPFGGIKESGIGREGSRYGIEEFLEIKYLC
IGGIR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagctcaaggacaaaggtctatttcaccagctttgtttcatcaacggcgcctgg
accggtgctgacagcggcgagaccgtggacgtcatgaaccccgccaccggggaaaaactg
ggtaccgttcccaagatgggaggcgccgaggctcgtcgtgccatcgaggcggcccatgcc
gccctgccatcctggcgcgcaaggaccgcacaagagcggtcggtaatcatcaggcgctgg
gccgacctgctgcttgagcaccaggacgacctggccgtgctgatgacggcggaacagggg
aaaccattggccgaggcgcgcggcgagacggtgtacgccgcttcgttcctggaatggttt
gccgaagaggggaaaagggtctacggggacgtgatcccgtcggatcaggccggcaagcgg
atcgtggtcctcaaggaaccggtcggcgtatgcgccgccatcaccccctggaactttccc
tccgccatgatcaccaggaaagtggggcctgcactggcggcaggatgcaccatcgtggtg
aagcctgccacggcgaccccatactcggccctcgcgctggcggtgttggcgcaacgcgcc
ggggtcccggaaggcgtcttttccgtcgtcaccggctccgcggcggccatcgggggggag
atgaccgggaacccgctggtgcgcaagctcacctttaccggttccaccgaggtcggcaag
aagctgatggcccagtgcgccgggacggtcaagaaggtttccctggaactgggcggcaac
gcccccttcatcgtcttcgacgatgccgatctcgatgccgccgttgaaggggcgctgatc
tccaagtaccgcaacaccggccagacctgcgtctgcaccaaccggttcctggtgcaggaa
gggatctacgaccgctttgccgagaagctggcgcagtcggtcgcccagctgaaggtgggg
gacgggctgaagggcgagacccagcaggggccgctgatcgacatggcggcagtggagaag
gtcgaggagcatatcggcgacgccctgtccaagggagcccgtgtcgtcaccggcggcaac
cgccatgccctgggagggtgcttcttcgagcctaccgtcctcgccggcgtgacgccggag
atgcacatcgcccgggaagagaccttcggcccggtggctcccctgttccgcttcagtacc
gaggaggaagcggtccgtttggccaacgacactgagttcggtctgtgcgcctacttctac
agccgcgacgtcacgcgggtctggcgggttgccgaagcgatcgagtccggcatcatcggc
atcaacacaggtctcatctccacggtggtggctccctttggcggcatcaaggagtccggc
atcgggcgggaaggttccaggtacggcatcgaggaatttctcgagatcaagtacctctgc
atcggcggcatacgatga
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