Geomonas oryzisoli: KP004_13945
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Entry
KP004_13945 CDS
T07282
Name
(GenBank) tandem-95 repeat protein
Organism
ger
Geomonas oryzisoli
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
Big_9
Big_11
Cadherin_5
CshA_repeat
Peptidase_S32
HemolysinCabind
EF-hand_5
Motif
Other DBs
NCBI-ProteinID:
QWV92309
LinkDB
All DBs
Position
complement(3190024..3198078)
Genome browser
AA seq
2684 aa
AA seq
DB search
MAQNNHAAGHQVVGKVVILYGTVKAISPDGAIRLLMPNSPIFADDRIVTESDGSASIVFD
GAQGNQLDLGRMMNVSIDQDVYGTVMSGDTTDTTAEVAQIQQALLTGDQPIELEAPAAGG
PADAGGTHPVFIVTPTGEEVQPTGGVTTTGVTFGTTGAIEGPVTVATTSPVLPTGPGVGS
DHGSVTEDASNPTLSTTGTLTVTDTFGNHYSINTAVAPIASEGAVGNITIDSAGHWTYSV
ANSAVQYLGAEDVKVEQFKVQSVDGTTHDIEIKIYGTNDGSQLTNDTNTVAEDHPATGNV
LTNDSDVDNTLTVASFQVAGDSHVYTYGETANIAGKGSLTIGQTGEYTFTPVADWNGDVP
QVTYTVNTGSTSTLDIKVTPVDDASVMTPDTNTVAEDHPATGNVLTNDSDVDNTLTVASF
QVAGDSHVYTYGETANIAGKGSLTIGQTGEYTFTPVADWNGDVPQVTYTVNTGSTSTLDI
KVTPVDDASVMTPDTNTVAEDHPATGNVLTNDSDVDNTLTVASFQVAGDSHVYTYGETAN
IAGKGSLTIGQTGEYTFTPVADWNGDVPQVTYTVNTGSTSTLDIKVTPVDDASVMTPDTN
TVAEDHPATGNVLTNDSDVDNTLTVASFQVAGDSHVYTYGETANIAGKGSLTIGQTGEYT
FTPVADWNGDVPQVTYTVNTGSTSTLDIKVTPVDDASVMTPDTNTVAEDHPATGNVLTND
SDVDNTLTVASFQVAGDSHVYTYGETANIAGKGSLTIGQTGEYTFTPVADWNGDVPQVTY
TVNTGSTSTLDIKVTPVDDASVMTPDTNTVAEDHPATGNVLTNDSDVDNTLTVASFQVAG
DSHVYTYGETANIAGKGSLTIGQTGEYTFTPVADWNGDVPQVTYTVNTGSTSTLDIKVTP
VDDASVMTPDTNTVAEDHPATGNVLTNDSDVDNTLTVASFQVAGDSHVYTYGETANIAGK
GSLTIGQTGEYTFTPVADWNGDVPQVTYTVNTGSTSTLDIKVTPVDDASVMTPDTNTVAE
DHPATGNVLTNDSDVDNTLTVASFQVAGDSHVYTYGETANIAGKGSLTIGQTGEYTFTPV
ADWNGDVPQVTYTVNTGSTSTLDIKVTPVDDASVMTPDTNTVAEDHPATGNVLTNDSDVD
NTLTVASFQVAGDSHVYTYGETANIAGKGSLTIGQTGEYTFTPVADWNGDVPQVTYTVNT
GSTSTLDIKVTPVDDASVMTPDTNTVAEDHPATGNVLTNDSDVDNTLTVASFQVAGDSHV
YTYGETANIAGKGSLTIGQTGEYTFTPVADWNGDVPQVTYTVNTGSTSTLDIKVTPVDDA
SVMTPDTNTVAEDHPATGNVLTNDSDVDNTLTVASFQVAGDSHVYTYGETANIAGKGSLT
IGQTGEYTFTPVADWNGDVPQVTYTVNTGSTSTLDIKVTPVDDASVMTPDTNTVAEDHPA
TGNVLTNDSDVDNTLTVASFQVAGDSHVYTYGETANIAGKGSLTIGQTGEYTFTPVADWN
GDVPQVTYTVNTGSTSTLDIKVTPVDDASVMTPDTNTVAEDHPATGNVLTNDSDVDNTLT
VASFQVAGDSHVYTYGETANIAGKGSLTIGQTGEYTFTPVADWNGDVPQVTYTVNTGSTS
TLDIKVTPVDDASVMTPDTNTVAEDHPATGNVLTNDSDVDNTLTVASFQVAGDSHVYTYG
ETANIAGKGSLTIGQTGEYTFTPVADWNGDVPQVTYTVNTGSTSTLDIKVTPVDDASVMT
PDTNTVAEDHPATGNVLTNDSDVDNTLTVASFQVAGDSHVYTYGETANIAGKGSLTIGQT
GEYTFTPVADWNGDVPQVTYTVNTGSTSTLDIKVTPVDDASVMTPDTNTVAEDHPATGNV
LTNDSDVDNTLTVASFQVAGDSHVYTYGETANIAGKGSLTIGQTGEYTFTPVADWNGDVP
QVTYTVNTGSTSTLDIKVTPVDDASVMTPDTNTVAEDHPATGNVLTNDSDVDNTLTVASF
QVAGDSHVYTYGETANIAGKGSLTIGQTGEYTFTPVADWNGDVPQVTYTVNTGSTSTLDI
KVTPVDDASVMTPDTNTVAEDHPATGNVLTNDSDVDNTLTVASFQVAGDSHVYTYGETAN
IAGKGSLTIGQTGEYTFTPVADWNGDVPQVTYTVNTGSTSTLDIKVTPVDDGITLTPVGV
SVNEANLSDGSAPSAAALTQTGSLSITAVDGVSSVHIGNTDISIADLHNLGSSSPIFIDG
VTYGNMEVTGYTDTATGGTLQYSFTLNDNVLNSSASVESYLEQVLVSVTDANGTVANANL
GITIVDDHPVFTMIDHAIVGNENSSTAGVLYGNHDINFGADSHGSINVVGDSLNGKLDYV
YTTHADGSVTAEAYSSTNHTADTHFFDLTINTNGTYAFDMVNARATFASGNISLLNVNGG
AATNSFVLNDATFNAVDTNHNGSIGNAEQLKPTSVGFGVGNGNVDVGEQFNVTFAHGIAV
DTISLYSKVQAAGSLTMSYVTDYLNPDGTTGHDTGSTTLGSNGEMHFDPLHDFTSITFTV
TAGSGKLDSFSFTERLIPNDETLNFHLSATDGDGDVTGSHDLNVTLLGVHTTGTVIAGTD
GSDAMIGTSGDDIFSTSGGHDTIMATKGNDHVTDFDVNHDTLDISSLVANAINPPQQGDD
GTGHLKLTILDNTNHPVGSVTFDNIASNDHGTIDTLLDHIKTTH
NT seq
8055 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaacaatcacgcagcagggcaccaggtggtcggtaaggttgtcattctgtac
ggaacggtgaaagcgatatccccggacggcgcgattcgtctgctcatgccgaacagcccg
attttcgcggacgaccgcatcgtcaccgagagcgacggcagcgcctccatcgtattcgac
ggtgcgcagggtaaccagctagacctgggccggatgatgaacgtgtccatcgaccaggac
gtttacggcacggtcatgtcgggcgataccacggataccaccgccgaggtggctcagatc
cagcaggcattgctcaccggcgatcagcctatcgagctggaagcaccggcagccggtgga
cccgccgatgcgggcggcacgcacccggtcttcatcgtcacccccaccggcgaagaagtt
cagccgaccggtggcgtgaccaccaccggcgtcaccttcggaacgacgggcgcgatcgaa
gggcctgtgacagtagccacgacttcaccagttcttcctacaggacctggcgttggttcg
gatcacggctctgtcacggaagatgcctcgaatccgactctctctactacgggtacactc
actgttaccgacacctttggcaatcactacagcatcaacacggctgttgcacctattgca
agtgagggtgctgttgggaacatcacaattgatagtgccggtcactggacctacagcgtt
gccaattccgcggtgcagtacctgggcgctgaggatgttaaagttgagcaattcaaggtg
cagagtgtagacggcacgacccatgacatcgagatcaagatctacggcacgaacgatggt
tcgcaacttacaaacgacaccaatacggtagctgaggaccacccggccacaggcaacgtc
cttaccaacgactcggatgtcgacaacacccttaccgtcgccagcttccaggttgccggt
gacagccatgtttacacctacggcgaaaccgccaacatcgccggcaagggtagccttacc
attggtcagactggcgaatacaccttcacgccggtggccgactggaacggtgacgttccg
caggtcacctacaccgtaaataccggttcgaccagcaccctggacatcaaggtcactccg
gttgacgacgccagcgtgatgacccccgacaccaatacggtagctgaggaccacccggcc
acaggcaacgtccttaccaacgactcggatgtcgacaacacccttaccgtcgccagcttc
caggttgccggtgacagccatgtttacacctacggcgaaaccgccaacatcgccggcaag
ggtagccttaccattggtcagactggcgaatacaccttcacgccggtggccgactggaac
ggtgacgttccgcaggtcacctacaccgtaaataccggttcgaccagcaccctggacatc
aaggtcactccggttgacgacgccagcgtgatgacccccgacaccaatacggtagctgag
gaccacccggccacaggcaacgtccttaccaacgactcggatgtcgacaacacccttacc
gtcgccagcttccaggttgccggtgacagccatgtttacacctacggcgaaaccgccaac
atcgccggcaagggtagccttaccattggtcagactggcgaatacaccttcacgccggtg
gccgactggaacggtgacgttccgcaggtcacctacaccgtaaataccggttcgaccagc
accctggacatcaaggtcactccggttgacgacgccagcgtgatgacccccgacaccaat
acggtagctgaggaccacccggccacaggcaacgtccttaccaacgactcggatgtcgac
aacacccttaccgtcgccagcttccaggttgccggtgacagccatgtttacacctacggc
gaaaccgccaacatcgccggcaagggtagccttaccattggtcagactggcgaatacacc
ttcacgccggtggccgactggaacggtgacgttccgcaggtcacctacaccgtaaatacc
ggttcgaccagcaccctggacatcaaggtcactccggttgacgacgccagcgtgatgacc
cccgacaccaatacggtagctgaggaccacccggccacaggcaacgtccttaccaacgac
tcggatgtcgacaacacccttaccgtcgccagcttccaggttgccggtgacagccatgtt
tacacctacggcgaaaccgccaacatcgccggcaagggtagccttaccattggtcagact
ggcgaatacaccttcacgccggtggccgactggaacggtgacgttccgcaggtcacctac
accgtaaataccggttcgaccagcaccctggacatcaaggtcactccggttgacgacgcc
agcgtgatgacccccgacaccaatacggtagctgaggaccacccggccacaggcaacgtc
cttaccaacgactcggatgtcgacaacacccttaccgtcgccagcttccaggttgccggt
gacagccatgtttacacctacggcgaaaccgccaacatcgccggcaagggtagccttacc
attggtcagactggcgaatacaccttcacgccggtggccgactggaacggtgacgttccg
caggtcacctacaccgtaaataccggttcgaccagcaccctggacatcaaggtcactccg
gttgacgacgccagcgtgatgacccccgacaccaatacggtagctgaggaccacccggcc
acaggcaacgtccttaccaacgactcggatgtcgacaacacccttaccgtcgccagcttc
caggttgccggtgacagccatgtttacacctacggcgaaaccgccaacatcgccggcaag
ggtagccttaccattggtcagactggcgaatacaccttcacgccggtggccgactggaac
ggtgacgttccgcaggtcacctacaccgtaaataccggttcgaccagcaccctggacatc
aaggtcactccggttgacgacgccagcgtgatgacccccgacaccaatacggtagctgag
gaccacccggccacaggcaacgtccttaccaacgactcggatgtcgacaacacccttacc
gtcgccagcttccaggttgccggtgacagccatgtttacacctacggcgaaaccgccaac
atcgccggcaagggtagccttaccattggtcagactggcgaatacaccttcacgccggtg
gccgactggaacggtgacgttccgcaggtcacctacaccgtaaataccggttcgaccagc
accctggacatcaaggtcactccggttgacgacgccagcgtgatgacccccgacaccaat
acggtagctgaggaccacccggccacaggcaacgtccttaccaacgactcggatgtcgac
aacacccttaccgtcgccagcttccaggttgccggtgacagccatgtttacacctacggc
gaaaccgccaacatcgccggcaagggtagccttaccattggtcagactggcgaatacacc
ttcacgccggtggccgactggaacggtgacgttccgcaggtcacctacaccgtaaatacc
ggttcgaccagcaccctggacatcaaggtcactccggttgacgacgccagcgtgatgacc
cccgacaccaatacggtagctgaggaccacccggccacaggcaacgtccttaccaacgac
tcggatgtcgacaacacccttaccgtcgccagcttccaggttgccggtgacagccatgtt
tacacctacggcgaaaccgccaacatcgccggcaagggtagccttaccattggtcagact
ggcgaatacaccttcacgccggtggccgactggaacggtgacgttccgcaggtcacctac
accgtaaataccggttcgaccagcaccctggacatcaaggtcactccggttgacgacgcc
agcgtgatgacccccgacaccaatacggtagctgaggaccacccggccacaggcaacgtc
cttaccaacgactcggatgtcgacaacacccttaccgtcgccagcttccaggttgccggt
gacagccatgtttacacctacggcgaaaccgccaacatcgccggcaagggtagccttacc
attggtcagactggcgaatacaccttcacgccggtggccgactggaacggtgacgttccg
caggtcacctacaccgtaaataccggttcgaccagcaccctggacatcaaggtcactccg
gttgacgacgccagcgtgatgacccccgacaccaatacggtagctgaggaccacccggcc
acaggcaacgtccttaccaacgactcggatgtcgacaacacccttaccgtcgccagcttc
caggttgccggtgacagccatgtttacacctacggcgaaaccgccaacatcgccggcaag
ggtagccttaccattggtcagactggcgaatacaccttcacgccggtggccgactggaac
ggtgacgttccgcaggtcacctacaccgtaaataccggttcgaccagcaccctggacatc
aaggtcactccggttgacgacgccagcgtgatgacccccgacaccaatacggtagctgag
gaccacccggccacaggcaacgtccttaccaacgactcggatgtcgacaacacccttacc
gtcgccagcttccaggttgccggtgacagccatgtttacacctacggcgaaaccgccaac
atcgccggcaagggtagccttaccattggtcagactggcgaatacaccttcacgccggtg
gccgactggaacggtgacgttccgcaggtcacctacaccgtaaataccggttcgaccagc
accctggacatcaaggtcactccggttgacgacgccagcgtgatgacccccgacaccaat
acggtagctgaggaccacccggccacaggcaacgtccttaccaacgactcggatgtcgac
aacacccttaccgtcgccagcttccaggttgccggtgacagccatgtttacacctacggc
gaaaccgccaacatcgccggcaagggtagccttaccattggtcagactggcgaatacacc
ttcacgccggtggccgactggaacggtgacgttccgcaggtcacctacaccgtaaatacc
ggttcgaccagcaccctggacatcaaggtcactccggttgacgacgccagcgtgatgacc
cccgacaccaatacggtagctgaggaccacccggccacaggcaacgtccttaccaacgac
tcggatgtcgacaacacccttaccgtcgccagcttccaggttgccggtgacagccatgtt
tacacctacggcgaaaccgccaacatcgccggcaagggtagccttaccattggtcagact
ggcgaatacaccttcacgccggtggccgactggaacggtgacgttccgcaggtcacctac
accgtaaataccggttcgaccagcaccctggacatcaaggtcactccggttgacgacgcc
agcgtgatgacccccgacaccaatacggtagctgaggaccacccggccacaggcaacgtc
cttaccaacgactcggatgtcgacaacacccttaccgtcgccagcttccaggttgccggt
gacagccatgtttacacctacggcgaaaccgccaacatcgccggcaagggtagccttacc
attggtcagactggcgaatacaccttcacgccggtggccgactggaacggtgacgttccg
caggtcacctacaccgtaaataccggttcgaccagcaccctggacatcaaggtcactccg
gttgacgacgccagcgtgatgacccccgacaccaatacggtagctgaggaccacccggcc
acaggcaacgtccttaccaacgactcggatgtcgacaacacccttaccgtcgccagcttc
caggttgccggtgacagccatgtttacacctacggcgaaaccgccaacatcgccggcaag
ggtagccttaccattggtcagactggcgaatacaccttcacgccggtggccgactggaac
ggtgacgttccgcaggtcacctacaccgtaaataccggttcgaccagcaccctggacatc
aaggtcactccggttgacgacgccagcgtgatgacccccgacaccaatacggtagctgag
gaccacccggccacaggcaacgtccttaccaacgactcggatgtcgacaacacccttacc
gtcgccagcttccaggttgccggtgacagccatgtttacacctacggcgaaaccgccaac
atcgccggcaagggtagccttaccattggtcagactggcgaatacaccttcacgccggtg
gccgactggaacggtgacgttccgcaggtcacctacaccgtaaataccggttcgaccagc
accctggacatcaaggtcactccggttgacgacggcatcacactcacaccggtcggcgtc
tccgtcaacgaggccaacctgtcggacggctcggccccttcggccgctgccctgacccag
accgggtcgctgtcgatcaccgcagtcgacggcgtcagcagcgtccacatcggcaacacg
gacatctccatcgccgatctgcacaacctcggctcctctagcccgatcttcatcgacggc
gtaacttacggcaatatggaagtcaccggttacaccgataccgctaccggcggcaccctc
cagtacagcttcacgctcaatgacaacgtgctgaactcgtcggccagcgtagagagctac
ctggaacaggtgttggtcagcgtcaccgatgccaacggtaccgttgccaacgctaacctc
ggcatcaccatcgtggacgatcatccggtcttcaccatgatcgaccacgccatcgtcggc
aacgagaacagctccactgccggcgtactctacggcaaccacgatatcaacttcggcgca
gattcccacggctccatcaacgtcgtcggcgattccctgaacggcaaactggactacgtg
tacaccactcatgcagacggctcggttaccgcggaggcatactcgagcacgaaccatacg
gccgatactcacttcttcgacctgaccatcaataccaatggcacctatgccttcgacatg
gtcaacgcccgcgcgacctttgcttcaggcaacatcagcctgctcaatgtgaacggcggt
gcggccaccaacagcttcgtcctcaacgatgcgaccttcaacgccgtcgacaccaaccat
aacgggtccatcggcaacgcggagcaactgaagccgacctcggtgggctttggcgtcggc
aacggcaacgtcgatgtgggcgagcagttcaacgtcactttcgcacacggcattgccgtc
gacaccatctcgctctacagcaaggttcaggccgctggttccctgaccatgtcctacgtc
acggattacctcaatcctgacggcactaccgggcatgataccggctccacaacgcttggc
agcaacggcgaaatgcattttgatccgctgcacgacttcacttccattaccttcacggtc
accgccggtagcggcaagctggacagcttttccttcaccgaacggctgatccccaacgac
gagactttgaacttccatctctcggcaaccgacggcgacggcgacgtgaccggatcgcac
gatctgaatgtgacgctgctcggtgttcataccactgggaccgttattgccggcaccgac
ggcagcgacgccatgatcggcacctcaggagacgacatcttctcgaccagtggtggtcat
gacaccatcatggcaacgaaggggaatgaccacgttactgatttcgatgttaaccatgac
acgctcgatattagtagcttggtcgccaatgcaatcaatccgccgcaacagggtgatgat
ggaacagggcacctcaagttaaccatccttgacaacactaaccatccagtcggctccgtg
acctttgacaatatcgcttctaacgatcatgggacgatcgacacgcttctggatcacatc
aagacgacccattga
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integrated database retrieval system