Geomonas oryzisoli: KP004_15375
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Entry
KP004_15375 CDS
T07282
Name
(GenBank) L,D-transpeptidase family protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
ger
Geomonas oryzisoli
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ger01002
]
KP004_15375
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ger01011
]
KP004_15375
Peptidases and inhibitors [BR:
ger01002
]
Cysteine peptidases
Family C82
KP004_15375
Peptidoglycan biosynthesis and degradation proteins [BR:
ger01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
KP004_15375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
LysM
LysM2_NFP
Motif
Other DBs
NCBI-ProteinID:
QWV92560
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All DBs
Position
complement(3527818..3528738)
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AA seq
306 aa
AA seq
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MVIDCTRGNRALVHCALAATFVLLTSPAFADQSAAPGRSLYPGGYIGELRRYVVLQRESL
IEIARRFDLGYNEIRDANPGVDPVLPKPGTVVTIPSAWIPPAVSDRPSIVVNLAELRLFY
FPQSNSSAIESYPIGIGDEGAETPVGNFVIVEKILDPSWHVPASIRRQRPELSAVVAPGV
RNPLGRHALRLSRQDMLIHGTNRPWGIGRRSSHGCLRLYPKDIASLFVKAHKGMQVRIID
EPVKVGIKEGRVFIEFHCHGREPVTVGEVLHMLADLGLLQEIDMGKVIRAYYENKGYPVE
ITWTNR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcgactgcactcgaggcaaccgggctctcgtccactgcgctctagcagcgacc
tttgtactgctaacttctcccgcgtttgcagatcagtcggctgccccgggtcgatccctc
taccccggcgggtatattggagaactgcgtcggtacgtggtactgcaaagggaatctctc
atcgaaatcgcccggagattcgatctcggctacaacgagatacgagatgccaaccctggg
gtcgatccagttctccctaaacccggtaccgttgttaccataccttcggcttggattccc
cctgcagtttcagatcgaccttcgattgtggtgaacttggctgagttacgtcttttctat
ttcccccagtccaattcctccgccatcgagtcctatcccataggcataggcgatgaaggg
gccgaaactccggtgggcaactttgtcatcgtagaaaaaattctcgaccctagctggcat
gtcccagcatcgatacgtcgacagcgacccgagctttctgctgtggtcgcacctggagta
cgcaacccccttgggcgacatgccctgcgtctgtctcgccaagacatgctcatacatgga
acgaaccgcccctgggggattggcagacgatcgagtcatggttgcttgcgcctgtatccg
aaggacattgcctcgctattcgtcaaagctcacaaaggcatgcaggtacggattattgat
gagcctgtgaaggtgggtatcaaggaggggagggtattcattgagttccactgtcacggg
agagaacctgtgacagtgggagaggtattacacatgttggcagacctgggactgctgcaa
gaaatcgatatggggaaggtcatccgtgcctattacgagaataaggggtacccggtagaa
ataacctggaccaatcgatag
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