Geomonas oryzisoli: KP004_15730
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Entry
KP004_15730 CDS
T07282
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ger
Geomonas oryzisoli
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ger03016
]
KP004_15730 (truA)
Enzymes [BR:
ger01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KP004_15730 (truA)
Transfer RNA biogenesis [BR:
ger03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KP004_15730 (truA)
Prokaryotic type
KP004_15730 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QWV92620
LinkDB
All DBs
Position
complement(3584150..3584902)
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AA seq
250 aa
AA seq
DB search
MRNIKLIIEYDGTAYAGWQVQPNGLTIQEVMEKALAKMLGEHTTLHASGRTDAGVHARGM
VACFKTERTMPLRAFREGLNSLLPSDIAVRDAAEVPLDFHARFNAQAKHYRYTMLLDDLR
SPLVRHTAWRVKGKLDVEAMRAACKLFVGEHDFAAFRGANCAAKTTVRRIYSMELVQEGR
LLHLDINGSGFLKNMVRIITGTLIEVGQGRLSAADVARLLKGGDRQNAGMTVPPQGLCLM
QVFYPGQSGE
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacatcaaactgatcatagaatacgacggcaccgcctacgccggctggcaggtg
cagcccaacgggctgaccatccaggaggtcatggaaaaggcgctggccaagatgctcggg
gagcacaccaccctgcacgcctccggccgcaccgacgccggggtgcacgcccgcggcatg
gtggcctgcttcaagaccgagcgcaccatgccgctacgcgccttccgcgaggggctgaac
tcgctgctcccgagtgatatcgcggtgcgcgacgctgccgaggtgccgctcgacttccac
gcgcgcttcaacgcgcaggcaaagcactaccgctacaccatgctgctcgacgacctccgt
tcgccgctggtgcgtcacacggcatggcgcgtcaagggcaagctcgacgtcgaggcgatg
cgcgccgcctgcaagctcttcgtcggcgagcatgacttcgccgccttccgcggcgccaac
tgtgccgccaagaccaccgtgcgccgtatctacagcatggaattggtgcaggaggggcgc
ctgttgcacctcgacatcaacggtagcggttttctgaagaacatggtgcgcatcatcacc
gggacgctcatcgaagtggggcagggcaggttgagcgcggccgacgtggcgcgtctgctc
aaggggggcgaccggcagaacgcgggaatgacagtgccgccgcaagggctctgtctcatg
caggttttctacccggggcagagcggggaatga
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