Geomonas oryzisoli: KP004_15965
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Entry
KP004_15965 CDS
T07282
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
ger
Geomonas oryzisoli
Pathway
ger00051
Fructose and mannose metabolism
ger00520
Amino sugar and nucleotide sugar metabolism
ger00541
O-Antigen nucleotide sugar biosynthesis
ger01100
Metabolic pathways
ger01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
KP004_15965 (gmd)
00520 Amino sugar and nucleotide sugar metabolism
KP004_15965 (gmd)
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
KP004_15965 (gmd)
Enzymes [BR:
ger01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
KP004_15965 (gmd)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
QWV92666
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All DBs
Position
complement(3638729..3639781)
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AA seq
350 aa
AA seq
DB search
MKKAFITGITGQDGSYLAELLLSKGYEVHGMIRRSSSFNTGRIDHIYRDPHEADTRLFLH
YGDLNDASSINRLLREIHPHEIYNLGAQSHVRVSFDVPEYTGEVDALGAVRLLEGIQEAG
ITTRFYQASSSELYGKVLETPQRETTPFYPRSPYACAKAYAFYITVNYRESYNMFACNGI
LFNHESPRRGETFVTRKITRAAARMKLGLQDRLYLGNLEAKRDWGFAGDYVEAMWRMLQA
DRPDDYVVATGETHSVREFAEQVFGSLGMELAWKGEGEREQGVDVKTGKVLIEIDPRYFR
PAEVDLLLGDATKARRELGWEPKTSFRQLVKMMTDSDLAIAERELRADGK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggcatttatcaccggaatcaccggtcaggatggttcctacctcgccgaactt
ctgctttccaaggggtacgaggtgcacggcatgatccgccgctcctcctccttcaatacc
ggccgcatcgatcacatctaccgtgacccccacgaagcggacacgcggctgttcctccat
tacggcgacctcaacgatgccagctcgatcaaccgcctgctgcgcgagatccatccccac
gagatctacaacctgggtgcccagagccacgtgcgcgtctccttcgacgttccggagtac
accggcgaggtggatgccctcggggcggtgcgcctcctggaggggatccaggaagcgggg
atcacgacccgcttctaccaggcctcctcttccgagctctacggcaaggtgctggagacg
ccgcagagggagaccactcccttctacccgcgctccccctacgcctgcgccaaggcctac
gccttctacatcacggtgaactaccgtgaaagctacaacatgttcgcctgcaacggcatc
ctgttcaaccacgagtccccgcgccgcggcgagaccttcgtgaccaggaagatcacccgg
gcggccgcacgcatgaagctcgggctgcaggaccggctctacctgggcaacctggaggcg
aagagggactggggcttcgcgggcgactacgtcgaggcgatgtggcgcatgctccaggcg
gaccgccccgacgactacgtggtggccaccggcgagacccacagcgtcagggaattcgcc
gagcaggtcttcggcagtctcggcatggagctcgcgtggaagggggagggggaacgggag
cagggggtcgacgtcaagaccggcaaggtgctgatcgagatcgacccgcgctacttccgc
ccggccgaggtcgacctgcttttgggggacgccaccaaggccaggcgcgagctcggctgg
gagccgaagacgagctttaggcagctggtcaagatgatgaccgactccgacctcgccatc
gcggaacgggagctcagagccgatggaaaatga
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