Geomonas oryzisoli: KP004_16085
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Entry
KP004_16085 CDS
T07282
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ger
Geomonas oryzisoli
Pathway
ger00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KP004_16085 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ger01007
]
KP004_16085 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ger03016
]
KP004_16085 (lysS)
Enzymes [BR:
ger01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
KP004_16085 (lysS)
Amino acid related enzymes [BR:
ger01007
]
Aminoacyl-tRNA synthetase
Class II (A)
KP004_16085 (lysS)
Transfer RNA biogenesis [BR:
ger03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
KP004_16085 (lysS)
Prokaryotic type
Other AARSs
KP004_16085 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QWV92686
UniProt:
A0ABX8J6H7
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All DBs
Position
complement(3665923..3667401)
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AA seq
492 aa
AA seq
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MEELSELLLQRRRKVDALWEAGINPYPNDYKPQHTSADVRDAYGDKEVIEDDPQTFVVAG
RIIMRRSFGKAAFVQVQDRKGRMQLYLKKDTLGEELFAEFENYDIGDIIGATGTPFRTKT
GELSLAVSTVRLLTKSLLPLPEKFHGLTDVETRYRQRYVDLIVSPEVREVFYKRSKVVHL
IREFMTKNDFLEVETPMMHPIPGGATAKPFVTHHNALDMELFLRIAPELYLKRLVVGGFE
RVFEINRNFRNEGISVRHNPEFTMMEFYQAYATFEDLMNFTEELLCHVAQELLGTLDFTY
GGEAISFQRPWKRFTVKEAILEYGDIDAKSLEDRDLAFAYAQKIGLELPEDIGYGKLITE
IFEEVAETKLIQPTFITNYPTEVSPLSRKNDHDPEYVDRFEFFCAGREMANAFSELNDPR
DQKERFLAQVAAKDKGDEEAHYMDEDYIRALEYGLPPTAGEGIGIDRLVMLLTDSPSIRD
VILFPQLRKEGK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggaagagttgagcgaactgctgctgcagagaagacgcaaggtagatgcattgtgggag
gcgggcatcaacccgtacccgaacgactacaaacctcagcatacctccgccgacgtgcgt
gacgcctacggcgacaaggaagtgatcgaagacgatccgcagaccttcgtggttgccggc
cgtatcatcatgcgccgctctttcggcaaggccgccttcgtgcaggtgcaggaccgcaag
gggcgcatgcagctctatctgaagaaggacaccctgggcgaagaactcttcgccgagttc
gaaaactacgacatcggcgacatcatcggcgccaccggcaccccgttccgcaccaagacc
ggtgaactgtccttggccgtttccaccgtgcgccttttgaccaagtcgcttttgccgctg
cccgagaagttccacggcctgaccgacgtcgagacccgttaccgccagcgctacgtcgac
ttgatcgtctccccggaagtgcgcgaagtcttctacaaacgctccaaggtcgtgcacctc
atccgtgagttcatgaccaaaaacgatttcctcgaggtcgagaccccgatgatgcacccg
atcccggggggcgccaccgcgaaaccgttcgtgacccatcacaacgcgctggacatggaa
ctgttcctgcgcatcgccccggagctctacctgaagcgcctggtggtcggcggcttcgag
cgcgtcttcgagatcaaccgcaacttccgtaacgaaggtatctcggtgcgccacaacccc
gagttcaccatgatggagttctaccaggcctacgcgaccttcgaggacctgatgaatttc
accgaggaactgctctgccacgtggcccaggaactcctggggacgctggacttcacctac
ggcggcgaggcgatcagcttccagcgcccctggaagaggttcaccgtgaaggaggcgatc
ctcgagtacggcgacatcgacgccaagagcctcgaggaccgcgacctggcattcgcctac
gcccagaaaatcgggctggagctccccgaggacatcggctacggcaagctgatcaccgag
atcttcgaggaggtcgccgagaccaagctgatccagccgaccttcatcaccaactacccg
accgaggtttcgccgctgtccaggaagaacgaccacgaccctgagtacgtggaccgcttc
gagttcttctgcgccggccgcgagatggccaacgccttctccgagctgaacgacccgcgc
gaccagaaggagcgcttcctggcccaggtcgccgccaaggacaaaggcgacgaagaggcg
cactacatggacgaggactatatccgcgccctggagtacggtctgccgcccaccgccggc
gaggggatcggcatcgaccgcctggtcatgctgctcaccgactctccgtcgatccgcgac
gtcatcctgttcccgcagttgcgtaaagagggcaaataa
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