Geomonas oryzisoli: KP004_16225
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Entry
KP004_16225 CDS
T07282
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ger
Geomonas oryzisoli
Pathway
ger03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KP004_16225 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ger03400
]
KP004_16225 (ung)
Enzymes [BR:
ger01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KP004_16225 (ung)
DNA repair and recombination proteins [BR:
ger03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KP004_16225 (ung)
Prokaryotic type
KP004_16225 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF896
Motif
Other DBs
NCBI-ProteinID:
QWV92714
LinkDB
All DBs
Position
complement(3697286..3697978)
Genome browser
AA seq
230 aa
AA seq
DB search
MSTETQIRLEPSWKCCLVDEFDKPYMRELREFLRQELSRRKIIYPKGNEYFNAFNSTSFD
NVRVVILGQDPYHGPDQAHGLCFSVPHGIEAPPSLINIFKEIQSDLGLAPADFRHGHLKA
WADQGVLLLNSVLTVEAGKAASHQGRGWEVFTDRVIALLNERKEHVVFMLWGAYAQKKGA
VIDETRHLVLRAPHPSPLSAHRGFLGCRHFSKANAYLVQHGLDPIDWRLS
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactgaaacgcagatacggttggagccgagttggaaatgctgtcttgtggacgag
tttgacaagccctacatgcgcgagctcagagagttcctgcgccaggagctgtccaggcga
aagatcatctaccccaaggggaatgaatacttcaacgctttcaactcaacttccttcgac
aacgtgagggtcgtcatcctgggacaggacccgtatcacgggccggaccaggcgcacggg
ctctgcttctccgtgccgcacggcattgaagcccctccctcactgataaacatattcaag
gagatacagagcgatctggggcttgcgccggccgacttcaggcacggccacctcaaggcc
tgggctgaccagggtgtcctgcttctaaatagcgtgctgacggtggaggcgggcaaggcg
gcatcgcaccaggggaggggctgggaggtcttcaccgaccgcgtcatcgcccttttgaac
gagcggaaggagcatgtcgttttcatgctgtggggggcctatgctcagaagaagggtgcg
gtcatcgacgagacgcggcacctggtcctgcgcgccccgcatccctcaccgctttcggca
caccggggcttcctggggtgccgacatttctccaaggctaacgcctacctagtgcagcac
ggcctggacccgatcgactggcgcctgtcctga
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