Geomonas oryzisoli: KP004_16630
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Entry
KP004_16630 CDS
T07282
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ger
Geomonas oryzisoli
Pathway
ger00730
Thiamine metabolism
ger01100
Metabolic pathways
ger01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
KP004_16630 (thiC)
Enzymes [BR:
ger01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
KP004_16630 (thiC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
Motif
Other DBs
NCBI-ProteinID:
QWV92786
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All DBs
Position
3780928..3782238
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AA seq
436 aa
AA seq
DB search
MTQLEYARKGIITDKMKTAALAEGVDAEFIRAGIAAGNIIICHNNKHVNGTPLAVGKGLR
TKVNANIGSSADDLNIDKELEKARVAVASGADAIMDLSTGGPVDEIRRAVIAETPACIGT
VPLYQAALDAVRKHKKAIVEMTVEDIFQGVIKHAEDGVDFITVHCGVTRSTVERMRKEGR
IMDVVSRGGAFTIEWMAHNNAENPLYEHFDRLLEITKAYDMTLSLGDGFRPGCLADATDR
AQIHELIILGELTQRAQEYGVQVMIEGPGHMPLNQIEANILLQKRLCHGAPFYVLGPLVT
DIAPGYDHITSAIGGTIAAAAGADFLCYVTPSEHLKLPSVEDVREGVMASRIAAHAADIV
KGVKGAIEKDNQMARCRKKLDWEGQFALAIDPVKARRLREESGVADHGACTMCGEFCAYK
VMDDATERERANAACA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacccagctggaatacgcccgcaaggggatcatcaccgacaagatgaagacggcagcc
ctcgccgagggggtcgacgccgagttcatccgcgccgggatcgccgccgggaacatcatc
atctgccataacaacaagcacgtgaacggcaccccgctcgcggtaggcaaggggttgagg
accaaggtcaacgccaacatcggcagctccgccgacgacctcaacatcgacaaggaactg
gaaaaggcgcgtgtggcggtggccagcggcgccgacgccatcatggacctctccacaggc
ggcccggtcgacgagatccgccgcgccgtgatcgcggagaccccggcctgcatcggcacc
gtgccgctgtaccaggcggcactcgacgcggtgagaaagcacaaaaaggcgatcgtcgag
atgaccgtggaagacatcttccagggggtcatcaagcatgccgaggacggcgtcgacttc
atcaccgtgcactgcggcgtgacccgctccaccgtcgagcgcatgcgcaaggaagggcgc
atcatggacgtggtttcccgcggcggcgccttcaccatcgagtggatggcgcacaacaac
gccgagaacccgctttacgagcacttcgaccgtctgctggagatcaccaaggcgtacgac
atgaccctgtcgctgggagatggtttccgccccggctgcctggccgacgccaccgaccgc
gctcagatccacgagttgatcatcctgggcgagctcacccagcgtgcccaggagtacggc
gtgcaggtgatgatcgagggtccgggccacatgccgctgaaccagatcgaggccaacatc
cttttgcagaagcgtctttgccatggcgcccccttctacgtcttggggccgctggtcacc
gacatcgccccgggctacgaccacatcacctccgccatcggcgggaccatcgccgccgcg
gccggtgccgacttcctgtgctacgtgaccccgtccgagcacctgaagctcccgagcgtc
gaggacgtgcgtgagggcgtgatggcgtcgcgcatcgcagcccacgccgccgacatcgtc
aaaggggtcaagggggccatcgagaaggacaaccagatggcgcgctgcaggaagaagctc
gattgggaaggtcagttcgcgctcgccatcgacccggtcaaggcgcgtcgtctgcgcgag
gagtccggcgttgccgaccacggcgcctgcaccatgtgtggcgagttctgcgcctacaag
gtgatggacgacgccaccgagcgcgagcgcgccaacgccgcctgcgcatag
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