Geomonas oryzisoli: KP004_17870
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Entry
KP004_17870 CDS
T07282
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ger
Geomonas oryzisoli
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ger03016
]
KP004_17870
Enzymes [BR:
ger01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
KP004_17870
Transfer RNA biogenesis [BR:
ger03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KP004_17870
Prokaryotic type
KP004_17870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
AAA_33
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
QWV93013
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All DBs
Position
4121866..4122870
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AA seq
334 aa
AA seq
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MTPHFLPTLVNPPFGDPGVYVDFQFARRAILFDLGEIHRLGPRKILRLSDVCISHTHIDH
FIGFDLMLRIMLGRDMALRLFGPPGILLQVEHRLASYSWNLIQSYPTEFVITVTELHPDG
SAQRARFSSRRVFAREEEHSLVFKDGVILDEENLRLRVAFLEHSIPCLAYAFEEKLHVNF
MKNRLAELGLPVGPWLSEVKRAVLRGEPDDTAVTAALPGQTEGRRLTIGELREQVLQVVQ
GEKIVYVTDTAFTPDNRRRIVELARGADYVFIEAVFLHVDAERARERAHLTARQAGELAR
EAGAARVIPFHFSPRHLGAEDELRREVSEAFAGL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgacaccccatttcctccccaccctggtgaaccctcccttcggagaccccggcgtctac
gtcgacttccagttcgcccgcagggccatcctcttcgacctgggggagatccaccgactc
ggtccccgcaagatcctgcgcttgagcgacgtctgcatctcccacacccacatcgaccac
ttcatcgggttcgacttgatgctgcgcatcatgctgggacgcgacatggcgctacgcctg
ttcggcccgcccggcatcctgctgcaggtcgagcaccggctcgcctcctacagctggaac
ctgatccagagttatccaaccgagttcgtcatcaccgtcaccgagttgcatcccgacggc
agtgcgcagcgggcccgcttcagctcccggcgcgtcttcgcgagggaggaggagcatagc
ctcgtcttcaaggacggcgtgatcctcgacgaggagaacctgcgcctgcgcgtcgccttc
ctggagcacagcatcccctgcctcgcttatgctttcgaggagaagctgcacgtgaacttc
atgaaaaaccgcctggccgaactggggcttccggtcgggccgtggctatcggaagtgaag
cgtgccgtcctgcgcggcgagccggatgacaccgcggtgacggcggcgctccccggccaa
acggaggggcggaggcttaccatcggggaactgagggagcaggtgctgcaggtggtgcag
ggagaaaagatcgtctacgtcaccgacaccgccttcacccccgacaaccgccgccgcatc
gtagaattggcgcgcggcgccgattacgtcttcatcgaggccgtgttcctgcacgtcgat
gccgagcgcgcccgtgagcgcgcccatctcacagcgcgccaggcgggagagctggcacgt
gaggcgggtgccgcacgggtgatccctttccacttttcccccagacacctcggagccgaa
gacgagctgcgtcgggaggttagcgaggcatttgccggcctgtaa
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