Geomonas oryzisoli: KP004_18640
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Entry
KP004_18640 CDS
T07282
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
ger
Geomonas oryzisoli
Pathway
ger03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KP004_18640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ger03400
]
KP004_18640
Enzymes [BR:
ger01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
KP004_18640
DNA repair and recombination proteins [BR:
ger03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KP004_18640
Prokaryotic type
KP004_18640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HTH_24
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QWV93160
LinkDB
All DBs
Position
complement(4301820..4302671)
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AA seq
283 aa
AA seq
DB search
MPTAPWRRQMHETVTMPAVAGFRHIILDYYRAHGRRLPWRETRDPYAILVSEIMLQQTQV
ERVREKYLQFLAVFPNWRELAEAELSRVLELWQGLGYNRRAVSLQSCARAVCEHFAGTLP
HEVAQLESLPGIGPYTARAVATFAFDTATPFIETNIRSVFIHHFFADAEAVRDADILPLV
ELTLDRDNPRDWYYALMDYGAMLKRSGVNPSRKSAHHVRQSPFRGSNREQRSLILRAILA
EPGIPLGRLEEQIPLVGKLLARNLEQLEREGFIRQERDRFWVR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgccgacggctccgtggaggcggcagatgcatgaaacagtaacgatgccggcagtagct
ggtttccggcacatcatcctggattactaccgtgcccacgggcggcgccttccctggcgc
gagacccgcgacccctacgccatcctcgtctccgagatcatgctgcagcagacccaggtg
gagcgggtgcgcgaaaagtacctccagttcctggccgtgtttcctaactggcgggaactg
gccgaggcggaactgtcccgggtgctggagctgtggcaggggcttgggtacaacaggcgc
gcggtttcgcttcagtcgtgcgcccgtgccgtctgcgaacacttcgcggggacactcccg
cacgaggtggcgcaactcgagtcgctgccgggcatcggcccgtacaccgcccgcgccgtc
gccaccttcgccttcgatacggccactcccttcatcgaaaccaacatccgttccgttttc
atccaccatttttttgccgatgccgaggcggtgcgcgacgcggacatcctccccctggtg
gagctcaccctggaccgggataaccctcgtgactggtactatgcactgatggattacggg
gccatgctcaagcgcagcggggtcaatccaagccgcaagagtgcgcatcacgtacgccaa
tcgccctttagaggctccaaccgggaacagcgcagtttgatcctgagggcgatcctggcc
gagccggggatcccgctggggcggctggaggaacagatcccccttgtgggtaaactgctg
gcgcgcaacctcgagcagctcgagcgggagggtttcatccggcaggaacgtgacagattt
tgggtccgctga
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