Geomonas oryzisoli: KP004_19435
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Entry
KP004_19435 CDS
T07282
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.8.1
]
Organism
ger
Geomonas oryzisoli
Pathway
ger00010
Glycolysis / Gluconeogenesis
ger00020
Citrate cycle (TCA cycle)
ger00620
Pyruvate metabolism
ger00650
Butanoate metabolism
ger00720
Other carbon fixation pathways
ger01100
Metabolic pathways
ger01110
Biosynthesis of secondary metabolites
ger01120
Microbial metabolism in diverse environments
ger01200
Carbon metabolism
ger01210
2-Oxocarboxylic acid metabolism
Module
ger_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
KP004_19435 (nifJ)
00020 Citrate cycle (TCA cycle)
KP004_19435 (nifJ)
00620 Pyruvate metabolism
KP004_19435 (nifJ)
00650 Butanoate metabolism
KP004_19435 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
KP004_19435 (nifJ)
Enzymes [BR:
ger01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase (ferredoxin)
KP004_19435 (nifJ)
1.2.8 With a flavin or flavoprotein as acceptor
1.2.8.1 pyruvate synthase (flavodoxin)
KP004_19435 (nifJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_9
Fer4_8
Fer4_10
Fer4
Fer4_6
Fer4_16
Fer4_17
Fer4_2
Fer4_4
Transketolase_C
LdpA_Fe-S-bd
Pyruv_OxRed_insertion
Fer4_13
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
QWV93311
UniProt:
A0ABX8J876
LinkDB
All DBs
Position
4462425..4466147
Genome browser
AA seq
1240 aa
AA seq
DB search
MSGTRKTMDGNTAAAHVAYALSETAAIYPITPSSTMGEVADEWAAEGRKNIFGQTLNIKE
LQSEAGAAGAVHGSLVAGALTTTFTASQGLLLMLPNMYKIAGEQLPGVFHVSARAIATHA
LSIFGDHQDVMAARPTGFAMLCSSSVQEVMDLALVAHLAALEGSLPFLHFFDGFRTSHEV
QKIEVIDYEEMARLVNYEKLAAFRSKAMNPEHPELRGTAQNPDIYFQGRERANPFYQALP
QVVIETMERVGQLTGRHYRLFDYVGHAEADRVIISMGSSCETVEEVVQYLNGKGEKVGLV
KVRLYRPFASELLLAAIPVSAAKITVLDRTKEPGSLGEPLYQDVCTAFLERGGEIPELYA
GRYGLGSKEFRPVHVKSIFENMNGRPGKRHFTVGITDDVSDSSLPVEGTLSTTPEGTIQC
RFWGMGADGTVGANKAAIKIIGDNTDLYVQAYFSYDSKKSGGITVSHLRFGESPIQSTYL
VDAADFISCQKAPYVQIYDLLEGIREGGTFLLNSPWSSVEAMEANLPATMRRAIAQKKVR
LYNVDAISIAQAAGLGGRINMIMQTAFFKLSGVLPFERAVELLKDSIRKEYGRKGEQVVE
MNLAAVDLAVESLVEIHYPDSWQQADDERGTDFRLKQPMPDYMRDMVFPILRQKGDDLPV
SSFTPDGVFPFSTARYEKRGVAINVPEWIKENCIQCNQCAYICPHATIRPFVATDGELAG
APETYQTIPVNARELKGMGFRIQVYPLDCMGCGNCADICPAKVPALVMKPIDTQAAVQEQ
NRAFAETLSPKGHLVKRTTVIGSQFQQPLLEFSGACSGCGETPYARIITQLFGERMMIAN
ATGCSSIWGASAPVSPYCANADGHGPAWNNSLFEDAAEFGFGYHMAVSQRRHLLADQVRR
AVHSLPEGELREELEGWLAGMMDPELSRRHGDRLKELLPKAGDNELLQQIAAGADLFTKK
SIWIYGGDGWAYDIGFGGLDHVISTGEDVNLLVMDTELYSNTGGQCSKATQLGAIARFAA
SGKRTSKKDLGRMAMTYGYVYVASIAIGADKNQTLRAIAEAEAYPGPSLIIAYSTCINQG
LRKGMGKSIEESQLAVRSGYWPLYRYNPLLKQEGKNPFILESKKPDGSLADFLSGEVRFQ
ALEKQNPEVARQLREQMEQEALERFRMFRDMADWQPSKGDVPKEGGRDHQHVPAAAGAAE
EPTPVCVSATSDPRYSRPGEPEEECDDGRAGIDKNINEPD
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaccaggaaaacgatggacggcaacacggcagcggcgcacgtcgcctacgcg
ctcagcgaaacggcggccatatatccgatcaccccttcctcgaccatgggggaagtggcg
gacgagtgggcggcggaaggtcgcaagaacatcttcgggcagaccttgaacatcaaggag
ctgcagtccgaggcgggggcggccggggcggtccacggttcgctggtggcaggggcgctc
accaccaccttcaccgcttcgcaggggctgttgctgatgctgcccaacatgtacaagatc
gccggtgaacagctcccgggggtgttccacgtttccgcgcgcgccatcgccacccacgcc
ctctccatcttcggcgaccaccaggacgtcatggccgcccgtcccaccggcttcgccatg
ctctgttcctcctcggtccaggaggtaatggatctcgccctggtggcgcacctggccgct
ttggagggaagccttcccttcctgcacttcttcgacggcttccgcacctcccacgaggtg
cagaagatcgaggtgatcgattacgaggagatggcccggctggtgaactacgagaagctg
gcagccttccgcagcaaggccatgaaccccgagcaccccgaactgcggggcacggcacaa
aaccccgacatctacttccaggggcgcgagcgcgccaaccccttctatcaagcgctgccc
caggtagtgatcgagaccatggaacgggtggggcagctcacgggacggcactaccgtctc
ttcgattacgtggggcacgccgaggcggaccgggtcatcatcagcatgggatcgtcctgc
gaaaccgtggaagaggtggtgcaatacctgaacgggaaaggggagaaggtggggctggtc
aaggtgcggctctaccgtcccttcgcctcggagctcctgctcgccgcgatccccgtctcg
gcggccaagatcacggtgctcgaccgcaccaaggagcccggttccctgggcgagccgctc
taccaggacgtctgcaccgcgttcctggagcgcggcggcgagatccccgagctctacgcg
gggcgctacggcctgggctcgaaggagttccgcccggtacacgtgaagagcatctttgag
aacatgaacggccgccccggcaaacgccacttcaccgtcggcatcaccgacgacgtgagc
gacagctcgctcccggtcgagggaaccctctccacgaccccggaggggactatccagtgc
cgcttctgggggatgggagccgacggcaccgtcggggccaacaaggctgccatcaagatc
atcggcgacaacaccgacctctacgtccaggcctacttttcctatgattccaagaagtcc
ggggggatcaccgtctcccacctgcgcttcggcgaaagcccgatccagtccacgtatctt
gtcgacgccgccgatttcatctcctgccagaaagccccctacgtgcagatctacgacctg
ctggaggggatcagggaggggggcaccttcctcttgaattcaccctggagcagcgtggag
gcgatggaggccaacctcccggccaccatgcgccgtgccatcgcgcagaagaaggtccgc
ctctacaacgtggacgccatcagcatcgcccaggcggcagggctcggggggcgcatcaac
atgatcatgcagaccgccttcttcaagctctccggcgtgcttcccttcgagcgggccgtg
gagctcttgaaggactcgatccgcaaggaatacggcaggaaaggcgagcaggtggtggag
atgaaccttgccgcggtcgacctcgccgtggaaagcctggtcgaaatccactaccccgac
tcctggcagcaggccgacgacgagcgcggcaccgacttcaggctgaagcagccgatgccc
gactacatgcgcgacatggtgttcccgatcctgcgccagaagggggatgacctccccgtt
tcctccttcacgcccgacggggtcttccccttctccaccgcgcgctacgagaaaaggggc
gtcgccatcaacgtccccgagtggatcaaggaaaactgcatccagtgcaaccagtgcgcc
tatatctgcccgcacgccaccatccgccccttcgtggccaccgacggggagctggcgggg
gcgccggagacctaccagaccattccggtcaacgcgcgggaactcaagggaatgggcttt
aggatccaggtctaccccctggactgcatggggtgcggcaactgcgccgacatctgcccg
gccaaggtcccggcgctggtcatgaagccgatcgacacccaggccgccgtgcaggagcaa
aaccgggccttcgccgagacgctgtccccgaaagggcacctggtgaagcggaccaccgtg
atcggcagccagttccagcagccccttctcgagttctccggcgcctgctccggctgcggc
gagaccccctacgccaggatcatcacccagctcttcggggagcgcatgatgatcgccaac
gccaccggctgcagctcgatctggggggcctccgccccggtctccccctactgcgccaac
gccgacgggcacggtcccgcctggaacaactcgctcttcgaggacgccgccgaattcggc
ttcggctaccatatggccgtttcccagcgcaggcacctcctggccgaccaggtgcgccgg
gccgtgcacagcctgccggaaggggagctgagggaagagctggaagggtggctggccggt
atgatggacccggaactctcccggcgccacggcgaccggctgaaggagctcctccccaaa
gccggggacaacgagctcctgcagcagatcgccgccggtgcggacctcttcaccaagaag
tcgatctggatctacggcggcgacggctgggcctacgacatcggcttcggcggcctggac
cacgtcatctccaccggcgaggacgtgaacctcctggtgatggataccgagctctactcc
aataccggcgggcaatgctccaaggcgacccagttgggcgccatcgcccgcttcgccgcc
tccggaaagaggacatcgaagaaggacctcgggcgcatggcgatgacctacggctacgtc
tacgtcgcctccatcgccatcggcgccgacaagaaccagaccctgcgcgccatcgccgaa
gccgaggcctaccccggcccgtcgctcatcatcgcctactccacctgcatcaaccagggg
ctcaggaaagggatggggaaatcgatcgaggaaagccagctcgcggtgagatccgggtac
tggccgctgtaccgctacaacccgcttctgaagcaggaagggaagaacccgttcatcctg
gaatccaagaagcccgacggctcgctcgccgacttcctctccggagaggtgcgtttccag
gccctggaaaagcagaaccccgaggtggcacggcaactgcgcgagcagatggagcaggag
gcgctggagcggttccgcatgttccgggacatggccgactggcagccgagcaagggggac
gtacccaaagaaggaggaagggatcatcaacacgtccccgcggccgcaggagccgccgag
gaaccgacgccggtctgtgtcagcgcaaccagcgacccgcgctacagccgccccggcgag
cccgaggaggaatgcgacgacggccgtgccgggatcgacaagaacatcaatgaacccgat
tag
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integrated database retrieval system
