Geomonas oryzisoli: KP004_19625
Help
Entry
KP004_19625 CDS
T07282
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ger
Geomonas oryzisoli
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ger03032
]
KP004_19625 (gyrA)
03400 DNA repair and recombination proteins [BR:
ger03400
]
KP004_19625 (gyrA)
Enzymes [BR:
ger01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KP004_19625 (gyrA)
DNA replication proteins [BR:
ger03032
]
Prokaryotic type
DNA Topoisomerases
KP004_19625 (gyrA)
DNA repair and recombination proteins [BR:
ger03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KP004_19625 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
QWV93349
LinkDB
All DBs
Position
4508069..4510582
Genome browser
AA seq
837 aa
AA seq
DB search
MLNQLNKVSVNIEDEMKRSYMDYAMSVIVGRALPDVRDGLKPVHRRCLYAMYDMSNDWNK
PYKKSARVVGDVIGKYHPHGDTAVYDTLVRMAQDFSLRYPLVDGQGNFGSIDGDSPAAMR
YTEIRMEQLAHELLNDLDKETVPFGPNYDDSLKEPLVLPSKFPNLLVNGSAGIAVGMATN
IPPHNLSEVVDAIVAIIENPQLSFEELVELIPGPDFPTGGFIYGREGIMKAYSTGRGIIQ
MRAKVQIETQKKTERQSIVVTEIPYQVNKAKLVEKIAELVKEKKIEGISDLRDESDREGM
RIVIELKKDENPTIILNHLYKQTQMQSSFGIIMLAIVHNRPRVLTLKETIEFFIEHRKEI
VTRRTIFDLKKAEARAHILEGLKIALDNLDEVIALIKASASPAEAKVGLMEKFGLSDLQA
QAILDMRLHRLTGLEREKILEELREILKYIARLKEILASEAEILKIIVGELLELKDKFGD
KRRSEIVMQTADISLEDTIVEEDMVVTISHTGYIKRNAVTLYRAQRRGGKGKTGMKTKEE
DFVEQLFIASTKDYLMFFTDAGKVYWLKVYEIPEAGRAARGKAIVNLLNLANNEKITTIL
PVKEFVDDKFIMMATRNGVVKKTNMMEYSHPRVGGIIAVNLDEGDKLISVALTDGKQDVL
LATANGKAIRFKEDDVRTVGRVSRGVRGMTLEDEDVVIGMEILNENFTDSTIFTVTENGY
GKRTEISEYRTQSRGGKGIITIKTTERNGQVVDIKQVVDDNDLMLITDQGKILRVSVAGF
SIIGRNTQGVRLMVKEENERVVAVARLAEKEDQEENEEENDIDEIVELEGDGGEGEE
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatcaactgaacaaggtatcggtaaacatcgaagacgagatgaagcgctcctac
atggactacgccatgtcggtcatcgtcggccgcgcgcttccggacgtacgcgacggcctg
aagccagtgcacaggcgctgcctctacgccatgtacgacatgtccaacgactggaacaag
ccgtacaagaaatcggcccgcgtcgtcggcgacgtcatcggtaagtaccacccgcacggc
gacaccgccgtctacgacaccctggtcaggatggcccaggacttttcgcttcggtacccg
ctggtcgacggccagggcaacttcggctccatcgacggcgactccccggcggcgatgcgt
tacaccgagatcaggatggagcagctcgcccacgaactgctgaacgacctggacaaggaa
actgtccccttcggcccgaactacgacgactccttgaaggagccgctggtcctcccctcc
aagttcccgaacctgttggtgaacggctcggccggcatcgcggtcggcatggcgaccaac
atcccgccgcacaacctctccgaggtggtggacgccatcgtggccatcatcgagaacccg
cagctctccttcgaggagctggttgagctgatcccgggtccggacttcccgaccggcggc
ttcatctacggccgcgaagggatcatgaaggcctactccaccggccgcggcatcatccag
atgcgcgccaaggtgcagatagagacccagaaaaagaccgagcgccagtccatcgtggtc
accgagattccgtaccaggtgaacaaggcgaagctcgtcgagaagatcgccgagctggtc
aaggagaagaagatcgaggggatctccgacctcagagacgagagcgaccgcgagggtatg
cgcatcgtcatcgagctcaagaaggacgagaacccgaccatcatcctgaaccacctgtac
aagcagacccagatgcagtcctcgttcggcatcatcatgctggccatcgtgcacaacagg
ccgcgcgtcctgacgctgaaggagaccatcgagttcttcatcgagcacagaaaagagatc
gtcacccgccgcaccatcttcgacctgaagaaggccgaggcccgggcccacatcctggaa
ggcttgaagatcgccctggacaacctggacgaggtgatcgccctgatcaaggcgagcgcc
tcgccggccgaggcgaaggtaggcctcatggagaagttcggtctctccgacctgcaggcc
caggccatcctggacatgaggctgcaccgcctgaccggtctcgagcgtgagaagatcctc
gaggagctgcgcgagatcctgaagtacatcgcccgcctgaaggagatcctcgcctccgag
gccgagatcctgaagatcatcgtgggcgaactgctggagctcaaagacaagttcggcgac
aagcgccgttccgagatcgtcatgcagaccgcggacatctcgcttgaggacaccatcgtc
gaggaagacatggtggtcaccatctcccacaccggctacatcaagcgtaacgcggtcacc
ctgtaccgcgcccagcgccgcggcggcaaagggaagaccggcatgaagaccaaagaggag
gatttcgtggagcagctgttcatcgcctccaccaaggactacctcatgttcttcaccgat
gccggcaaggtgtactggctcaaggtgtacgagatcccggaagcgggccgcgctgcgcgc
ggcaaggcgatcgtgaacctgttgaacctcgccaacaacgagaagatcaccaccatcctc
ccggtgaaggagttcgtggacgacaagttcatcatgatggccacgagaaacggcgtggtg
aagaagaccaacatgatggagtactcgcacccgagggtgggcggcatcatcgccgtcaac
ctggacgaaggggacaagctcatctccgtggcgctcaccgacggcaagcaggacgtgctg
ctcgcgaccgccaacggcaaggcgatccgcttcaaggaggacgacgtccgcaccgtgggc
cgcgtctcccgcggcgtgcgcggcatgaccctcgaggatgaggacgtcgtcatcggcatg
gagatcctcaacgagaacttcaccgactccaccatattcaccgtgaccgagaacggctac
ggcaagaggaccgagatcagcgagtaccgcacccagtcccgcggcggcaaggggatcatc
accatcaagaccaccgagagaaacgggcaggtggtggacatcaagcaggtggtggacgac
aacgacctgatgctgatcaccgaccagggcaagatcctgcgcgtctcggtggccggcttc
tccatcatcggtcgcaacacccagggcgtgcgcctcatggtgaaggaagagaacgagcgc
gtggtcgccgtcgcccgcctggccgagaaagaggaccaggaagagaacgaggaagaaaac
gatatcgacgaaatcgtcgaactcgaaggtgacggtggcgagggcgaggagtag
DBGET
integrated database retrieval system
