Geomonas oryzisoli: KP004_20180
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Entry
KP004_20180 CDS
T07282
Name
(GenBank) PAS domain-containing protein
KO
K13587
two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:
2.7.13.3
]
Organism
ger
Geomonas oryzisoli
Pathway
ger02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KP004_20180
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ger01001
]
KP004_20180
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ger02022
]
KP004_20180
Enzymes [BR:
ger01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
KP004_20180
Protein kinases [BR:
ger01001
]
Histidine kinases
Cell cycle family [OT]
KP004_20180
Two-component system [BR:
ger02022
]
Cell cycle family
CckA-CtrA/CpdR (cell cycle control)
KP004_20180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MASE3
PAS_4
PAS
HATPase_c
Response_reg
PAS_9
PAS_3
PAS_7
HisKA
HPTransfase
PAS_8
Motif
Other DBs
NCBI-ProteinID:
QWV93448
LinkDB
All DBs
Position
4636687..4639425
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AA seq
912 aa
AA seq
DB search
MPEGKVRSSWQLVLFALAVAAGVPFLLLELSGAALYVVLDVPSYLTFHNTVEIFSVMVSL
SIFGVGWFSYNQSRDRHSLFLAVAFLGIGLMDFMHTLAYTGMPPLVTPNSPNKSTQFWIA
VRLFSAAAFLASAFVSEQNRSRLLGRVPLMLVTLAVTAATFTAVIFRPDLVPDTFVAGVG
LTPFKKGSELVVIALFVLATLAYVKRLTASRDRIYLYYLSAFILCIVSELTFTVYKSVFD
SFNLLGHLYKLFAFLLIYRGIFAAAIKRPYRQLNLALGELRHTNDVLVAIMDSIPHCIFW
KDRRSVYLGCNREFAKSAGLADPAQIVGKCDYDLPWSREESDGYRADDSEVMQKNQAKMH
IIENLTRADGSVTWIETSKMPLTDEDGAVRGVLGIYEDITARKLAEERLSETLQFNQEII
NSAREGIIVYDRELRYLVWNPYMEEISGRPAAEVVGKRPAEVFPWLAETGLVRRLEQLLA
GGAPTVTEFGGRHVSGRMLCMSDASAPLRSSSGEVIGIIGTVRDITERRGIEEQLRQAQK
LESVGRLAGGVAHDFNNKLTVIMGCAELAARQTGEAAVLEHLRLIVKAAEQSRDITRQLL
AFSRQQVVAPRTVQVNGMLWELKKSLGRLIGEDISIVLAPGEQLWSISMDPVQLDQIIMN
LAVNARDAMPRGGTITIETANVQFEEPPPLHPEVPPGGYVRITCRDTGVGMDAETRAHVF
EPFYTTKEQGKGTGLGLATVYGIVRQNGGFIDLETAPGAGSAFSICLPRCADGEENHTPP
PAATRQQGAGTVLLVEDEDMVRELTASILESLGYRCLATADPREALEVAGNPEVAIDLVL
TDVVMPGMRGPEMMQRMRRERPDIKCIYMSGFTDAIMDEESGSWEGGAFLKKPFQMEELA
RMVQSVLGTQPG
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagggtaaggtgcgttccagttggcagttggtgcttttcgcgctggccgtagcg
gccggcgtcccgttcctgctcctggagctgtcgggggcggcgctgtacgtggtgctggac
gtcccctcctacctcaccttccacaacaccgtggaaatattcagcgtcatggtctccctc
tccatattcggggttgggtggttctcctacaaccaaagccgtgaccggcactccctcttc
ctcgccgtcgccttcctgggtatcgggctgatggacttcatgcacaccctggcctacacc
ggcatgccccccctggtcaccccgaactcccccaacaaatcgacccagttctggatcgcg
gtgcgcctgttctccgccgccgccttcctcgccagcgccttcgtctccgagcagaaccgc
tcccgtctcctgggtcgggtgccactcatgctggtgacgctggccgtcaccgccgccacc
ttcaccgcggtcatcttccgtcccgacctggtgccggacaccttcgtggcgggggtgggg
ttgacgccgttcaaaaagggctccgagctggtcgtcatcgccctgttcgtgctggccacg
ctcgcctacgtgaagcgcctcaccgcctcccgggaccgcatctacctgtactacctgagc
gccttcatcctctgcatcgtgagcgagctcaccttcaccgtctacaagagtgtcttcgac
agcttcaacctgctggggcacctgtacaagctgttcgccttcctgctgatctaccggggc
atctttgctgccgccatcaagcgcccctaccggcaactgaacctggccctcggagaactg
cgccacaccaacgacgtcctcgtggccatcatggactcgatcccccactgcatcttctgg
aaggaccgccgcagcgtctatctcggctgcaaccgtgagttcgccaaaagcgcggggctg
gccgatcctgcccagatcgtcggcaagtgcgactacgaccttccctggagccgcgaagag
tccgacgggtaccgcgccgacgacagcgaggtcatgcagaagaaccaggccaagatgcac
atcatcgagaacctgacccgggccgacggcagcgtcacctggatcgagaccagcaagatg
ccgcttaccgacgaggatggcgcggtgcggggggtgctcgggatctacgaggacatcacg
gcgagaaagctggccgaggagcggctctcggagacgctgcagttcaaccaggagatcatc
aacagtgcccgggaggggatcatcgtctacgaccgcgagctgcgctacctggtctggaac
ccgtacatggaagagatcagcggcaggcccgccgccgaggtcgtgggcaagcgccccgcg
gaggtcttcccgtggcttgcggagaccgggttggtgcgccgcctggagcagcttctggcc
gggggcgcacccacggtcaccgaattcggcggcaggcacgtgagtgggaggatgctctgt
atgtccgacgcctccgccccgttgagaagcagctccggcgaagtaatcgggattatcggc
acggtgcgcgacatcaccgagcggcgcggcatcgaggagcagctgcgccaggcccagaag
ctggagtcggtcgggcggctggcgggtggggtggcccacgatttcaacaacaagctcacg
gtgatcatggggtgcgccgaactggcggcgcggcagaccggggaagccgcggtcctggaa
cacctgcgtctgatcgtcaaggccgccgagcagtcccgcgacatcacccggcagctgctc
gccttctcgcgccagcaggtcgtcgcgcccagaacggtgcaggtgaacggcatgctgtgg
gagctgaaaaagtcattgggacggcttatcggcgaagacatctccatcgtgctggcaccc
ggggagcagctttggagcatcagcatggacccggtgcagctggaccagatcatcatgaac
ctggcggtgaacgcccgcgacgccatgccccggggagggaccatcaccatcgagaccgcc
aacgtgcagttcgaggagccgcctcccctgcacccggaggtgccgccgggaggatacgta
aggatcacctgccgcgacaccggtgtcggcatggatgccgagacccgcgcccacgtcttc
gagcccttctacaccaccaaggagcaggggaaagggaccgggctcgggctggccaccgtc
tacggcatcgtcaggcaaaacggaggcttcatcgatctcgagaccgcacccggtgccggc
agcgcgttcagcatctgcctgccgaggtgcgccgacggcgaggagaaccatacgccgccg
cccgccgcaacgcggcaacaaggagcggggacggtgctgctggtcgaggacgaggacatg
gtgcgcgagctgaccgccagcatactggagtccctggggtaccgctgcctcgccacggcc
gacccgcgcgaggcgctggaggtggccggcaaccccgaggtcgccatcgacctggtgctc
accgacgtggtgatgcccggcatgcggggaccggagatgatgcagcggatgcggcgcgag
cgcccggatatcaagtgcatctacatgtccggcttcaccgatgccatcatggacgaggag
agcgggagttgggaggggggcgccttcttgaagaagccgttccagatggaagagctggcg
cgcatggtgcagtcggtgctcggcacgcaacccggctga
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