Geomonas oryzisoli: KP004_20600
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Entry
KP004_20600 CDS
T07282
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ger
Geomonas oryzisoli
Pathway
ger03030
DNA replication
ger03430
Mismatch repair
ger03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KP004_20600 (dnaX)
03430 Mismatch repair
KP004_20600 (dnaX)
03440 Homologous recombination
KP004_20600 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ger03032
]
KP004_20600 (dnaX)
03400 DNA repair and recombination proteins [BR:
ger03400
]
KP004_20600 (dnaX)
Enzymes [BR:
ger01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KP004_20600 (dnaX)
DNA replication proteins [BR:
ger03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KP004_20600 (dnaX)
DNA repair and recombination proteins [BR:
ger03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KP004_20600 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_2
AAA_30
DUF3646
RCF1-5-like_lid
AAA_14
PIF1
AAA_16
ResIII
Mg_chelatase
DUF815
AAA_19
AAA_18
nSTAND3
Glyco_tranf_2_5
DEAD
Motif
Other DBs
NCBI-ProteinID:
QWV93525
UniProt:
A0ABX8JDB3
LinkDB
All DBs
Position
4730616..4732379
Genome browser
AA seq
587 aa
AA seq
DB search
MSYLVLARKWRPQTFSDLVGQEHVSQTLKNAIDGGRVAHAFLFTGARGVGKTSSARILAK
ALNCESGLTVEPCNTCSTCLEITDGNSVDVFEIDGASNTGVDDIRELRDNIKYLPSRSRY
KIFIIDEVHMLTTNAFNALLKTLEEPPPHVKFIFATTEPHKVPITILSRCQRFDFKRIAL
PRIVSRLRYIVDQEGVQVSDEALSVVARKGDGSMRDSLSTLDQVLAFCGNSVSDADVAAL
LGVVDRRLIMDGCRSVLEADVKGALGIVAQVDSFGYSMRQFCQELINQFRNISILKAVGD
PGDLLELSDTEQGELKALGGQASVQDLQRHLAILLKAEAEMAHAGFPRLILEMALMKMAT
LAPAIPVQELLARLDALERGGALPPRTEAPQPSAPAQRPAQQPAPQQYAPQQQAAPTRPA
AAPVAAAPVAAAPQQSAAPQAAPAAFATGGDLWGSFVQAVKAKKPMLGGALEEVYPVKVA
QGVLEIGCLQGSFQLTRLQDPEQINELKSLAQAHFGVPTQIKVVALNGPPTDAAPTLSEK
KSLENAERKAVLRREAEEHPLVAAAVELFDGEIAEVRELPQIEVAKS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
ttgtcctatcttgttcttgctagaaaatggcgcccccagaccttcagcgacctggtcggc
caggagcacgtcagtcagaccctcaaaaacgccatcgacggcggcagggtcgcgcacgcc
tttctctttaccggcgcccgcggcgtgggcaagaccagttcggcgcgcatcctcgccaag
gcactcaactgcgagagcggtctgaccgtcgagccctgcaacacctgctctacctgcctg
gagatcaccgacggcaactcggtggacgtcttcgagatcgacggcgcctccaacaccggt
gtcgacgacatccgggaactgcgggacaacatcaagtacctcccttcgcgctcgcgctac
aagatcttcatcatcgacgaagtgcacatgctgaccaccaacgccttcaacgcgctgttg
aagacgctggaggagccgccgccgcacgtcaagttcatcttcgccaccaccgagccgcac
aaggttcccatcaccatcctgtcgcgctgccagcgcttcgacttcaagaggatcgcgctg
ccgcgcatcgtctcgaggctgcgctacatcgtggaccaggagggggtgcaggtttcggac
gaggcgctctcggtcgtggccaggaagggcgacggcagtatgcgcgactccctctccacg
ctggaccaagtgctcgccttctgcggcaacagtgtctccgacgcggacgtcgccgccctt
ttgggggtggtggaccggcgcctgatcatggacggctgccgcagtgtgctcgaggcggac
gtgaagggtgcgctcggtatcgtggcccaagtcgattccttcggctacagcatgcgtcag
ttctgccaggaactgatcaaccagttccgcaacatctccatcctcaaggcggtcggggat
cccggtgacctccttgagctctccgataccgaacagggcgagttgaaggcgctgggtggg
caggcttcggtccaggacctgcagcgccacttggccatcctgctcaaggctgaggccgag
atggcgcacgccggcttcccgcgactgatcctggagatggcgctgatgaagatggcgacc
ctggccccggccatcccggtgcaggagctgctggcgcgcctcgacgccctggaaaggggg
ggggcgctgccgccgcgcacagaggccccgcagccgtccgcccccgcacagcgtccggca
cagcagccggcgcctcagcagtatgcgccgcagcagcaggcggcgcccacgcgacccgcg
gctgctcccgttgcggcagcaccggtcgcggcagcaccgcagcagagcgcggcgccgcag
gcggcaccggctgccttcgccacgggtggtgacctctggggcagcttcgtgcaggcggtc
aaggccaagaagccgatgctgggcggtgcgctggaagaggtctacccggtcaaggtggcc
cagggcgtgttggagatcggctgcctgcagggctccttccaactgacccgcctgcaggat
cccgagcagatcaacgagctgaagagcctggcgcaggcccatttcggcgtccccacccag
atcaaggtggtcgccctgaacggcccccctacggacgccgccccgaccctgtcggaaaaa
aaaagccttgaaaacgccgagcgaaaggcagttttgagacgggaggcggaggagcatccg
ctggtggcggcggcggtcgagcttttcgacggcgagatcgccgaggtgcgggaacttccc
caaatagaagttgcaaaatcataa
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