Geomonas oryzisoli: KP004_20760
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Entry
KP004_20760 CDS
T07282
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ger
Geomonas oryzisoli
Pathway
ger03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KP004_20760 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ger03400
]
KP004_20760 (priA)
Enzymes [BR:
ger01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KP004_20760 (priA)
DNA repair and recombination proteins [BR:
ger03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KP004_20760 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
DAP3
Motif
Other DBs
NCBI-ProteinID:
QWV93557
LinkDB
All DBs
Position
4769757..4772015
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AA seq
752 aa
AA seq
DB search
MQTTSQHIVEVAIPLPLEGSFHYLVPERLSSAVQAGKRVLVPFGRRKVTGYLLGDADAPG
AGELKEVLEILDEEPLFTAAELDFYRWIAGYYLHPLGEVIKMALPAGINLVSRYRCEQSE
DGTPVLKEYLAGGKSVRTERVYTADPDCTARPRGKGLEILEYLLEVGECSGPKLRERFGP
CTAQLGRLVELGAARLSQREVYRDPFKAKEYGHDGPLPLNPAQAEALCKVSAALAAGEFA
PFLLHGVTGSGKTEVYLQSIAVALDAGRSALVLVPEIALTPQLVGRFKRRFDCGIAVLHS
GLSDGERFDEWRRIRRGEATIVIGARSALFAPLEGIGVIVVDEEHEGSYKQSEGVRYNAR
DLALVRGKLAKALVLLGSATPLVTSYHAAQTGRLGYLSLPDRVRDLPMPETRMLDARNHK
GEIFLPELVEAMGENLDAGGQTLLFLNRRGFATYLVCETCGHVLRCPNCAVTLTYHRIKG
KHVCHYCDFTMLPPSTCPDCQSGAITLLGRGTERVEDQVQKLLPDARVSRMDRDSTRGKG
GHARVLKELEEGTVDILIGTQMIAKGHDFPGVTLVGVLSADASLNLPDFRSAERTFQLVT
QVMGRAGRGDKPGRVLVQTLAPEHYALTHAVAHDYLGFYREEIAFREEVGYPPFAHLAAL
TFSAVAAGQGEHAADEAAAVLRRIKREARLRVEVLGPVTAPLGKVRGRFRWQILLKGVER
ADLHRLLFHFRSRFSHPSTVRLTIDVDPVDML
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcagacaaccagccagcacatcgtagaggtcgccatcccgctccccctggagggaagc
ttccactacctggtgcccgagcgtctgtcatccgcggtccaggccggcaagcgcgtcctc
gtcccgttcgggaggcgcaaggtcaccggctaccttttgggcgatgccgacgcgcccggc
gcgggcgagttgaaggaagtgctcgagatcctcgacgaggagcccctgttcaccgcggcc
gagctcgatttctaccgctggatcgccggctattacctgcacccgttgggcgaggtgatc
aagatggcgctcccggccgggatcaacctggtgagccgctaccgctgcgagcagtccgag
gacggcaccccggtgctcaaggagtacctggccggcggcaagagcgtgcgcaccgagcgg
gtctacaccgcggaccccgactgtacggcgcgcccccggggcaaggggctggagatcctt
gagtacctgctggaggtcggcgagtgttccggcccgaagctcagggagcgcttcggcccc
tgcaccgcccaattggggcgcctggtggaactgggtgctgcacgtctttcccagcgcgag
gtgtaccgcgaccccttcaaggcgaaggagtacggccacgacggtccactccctttgaac
cccgcccaggccgaggccctgtgcaaggtgtcggccgcgctcgctgccggcgagttcgcg
ccctttctgctgcacggcgtcaccggcagcggcaagaccgaggtgtacctgcagtccatc
gcggtggcgctcgacgccggcaggagcgcactggtactggtccccgagatcgccctcacc
cctcagctggtgggacgcttcaagcgtcgcttcgactgcggcatcgccgttttgcactcc
gggctctccgacggggagcgcttcgacgaatggcgccgcatccggcgcggcgaggcaacc
atcgtcatcggcgcccgctccgccctgttcgcgccgctggaaggaatcggggtgatcgtg
gtcgacgaggagcacgaggggagctacaagcagtccgagggggtgcgctacaacgcacgc
gacctggcgctggtccgcggcaagctcgccaaggccttggtgctcctgggctcggcgacg
ccgctggtaacgagctaccacgccgcccagaccggccggctcggatacctgagcctcccg
gaccgggtgcgcgacctccccatgccggagacgaggatgctggacgcgcgcaaccacaag
ggggagatcttcctccccgaactggtcgaggccatgggggagaacctggacgccggcggc
cagactctgctctttttgaaccggcgcggcttcgccacctacctcgtctgcgagacctgc
ggacacgtgctgcgctgccccaactgcgccgtgaccctcacctaccaccgcatcaagggg
aagcacgtctgtcactactgcgacttcaccatgctcccgccgagcacctgtcccgactgc
caaagcggcgccatcacgcttctggggcgcggcaccgagcgggtcgaggaccaggtgcag
aagcttcttcccgacgcgcgggtgtcccgcatggatcgcgattccacccggggcaagggg
gggcacgcccgggtcctgaaggagctggaggaagggacggtcgacatcctgatcggcacc
cagatgatcgccaagggacacgacttcccgggggtgaccctggtcggcgtgctctcggcc
gacgcctcgttgaatcttcccgacttccgcagtgccgagcgcaccttccagctggtgacc
caggtgatggggcgggccgggcgcggcgacaagccggggcgggtgctggtgcagacgctg
gcgccggagcactacgcgctcacccatgccgtggcgcacgactacctgggcttttaccgg
gaggagatcgccttccgtgaggaggtcggctaccctccctttgcgcacctggcggcgctg
accttttcggcggtggcggcggggcagggggagcacgcggccgatgaggcggcggcggtc
ctgcgcaggatcaagcgcgaggcgcggctccgggtggaagtgctgggtccggtcacggct
cccttgggcaaggtgcgggggcggtttcgctggcagatactgttgaagggggtggagcgg
gccgacctgcaccggctcctctttcatttccggagccgcttcagccacccctccaccgtc
cgcctcaccatcgacgtggacccggtggatatgctgtaa
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