Gemmata sp. SH-PL17: VT84_00380
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Entry
VT84_00380 CDS
T04358
Symbol
alkA_1
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VT84_00380 (alkA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ges03400
]
VT84_00380 (alkA_1)
Enzymes [BR:
ges01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
VT84_00380 (alkA_1)
DNA repair and recombination proteins [BR:
ges03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VT84_00380 (alkA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AMV22834
UniProt:
A0A142X7T0
LinkDB
All DBs
Position
complement(100041..100709)
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AA seq
222 aa
AA seq
DB search
MSTSFYKKARKHLSGNCPVMKQIIDRVGPCTLTPNGDDPFTLLVRCIISQQISTKAARSI
YERLAAALNGPPPTSGTDQEKSAALTIPLAKLAEFTEAKYKECGISGPKQRTMRAVIDHV
NANPELLPSIPDLGDDAIREQLTIIKGVGPWTVDMYLLFGLGRPDVLAVGDYGIKVAVKN
QFNLRKLPDAAKMTKLAKPWEPYRSVASWYLWRSLELKADVE
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtccacatcattctacaagaaggcgcggaagcacctctcgggcaattgcccggtcatg
aagcaaatcattgaccgtgtcgggccgtgtacgctcacccccaacggggacgacccgttc
acgctgctcgtgcggtgcatcatctcgcaacagatctcgaccaaagccgcccggtcgatc
tacgaacgactcgccgccgcactcaacggtcctccgcccactagcgggaccgatcaggag
aagagtgcggcactgacgattccgctggcgaaattggcggagttcaccgaggcgaagtac
aaggagtgcggtatctccgggccgaagcagcggaccatgcgcgcggtcatcgatcacgtg
aacgccaaccccgaactgctgccgagcatccccgatcttggtgacgatgccattcgcgag
caactgacgattatcaagggtgtcggtccgtggaccgtcgacatgtacttgctcttcggc
ttggggcgcccggacgtgttggcggtcggtgactatggaatcaaggtcgcggtgaaaaac
cagttcaacctccgcaaattgcccgacgcggcaaagatgaccaagctcgcgaagccgtgg
gagccgtaccgcagcgtcgcgtcgtggtacctctggcggagcctggaattgaaagcggat
gttgaatga
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