Gemmata sp. SH-PL17: VT84_00570
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Entry
VT84_00570 CDS
T04358
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VT84_00570 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ges03400
]
VT84_00570 (mutM)
Enzymes [BR:
ges01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
VT84_00570 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
VT84_00570 (mutM)
DNA repair and recombination proteins [BR:
ges03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VT84_00570 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF7571
TMEM106_N
Zn_Tnp_IS91
Thioredoxin_7
Motif
Other DBs
NCBI-ProteinID:
AMV22872
LinkDB
All DBs
Position
139189..140073
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AA seq
294 aa
AA seq
DB search
MPELPEVETVVRDLRPLLVGRTITDVRQSRHKLRRPWKPAWNANAIDSGVESVRRRGKWI
LIDLASQPSSPLLRVHLGMSGQFTVVPAALAEPDHVHVVFALDGGNELRLRDPRRFGAAE
YFPDRAALEAEMNADLGPEPFRLDADYFRSAVRGTARNLKAILLDQKIVAGVGNIYADEA
LFRAKLHPGRTGKSVTNAECDHLREAIEAVLLRAIESRGSTIRDYVGGSGLRGGFQNEFA
VYGRTDEQCSTCETAIVCARFAGRASHYCPQCQSQGSGKKAKSKKAPRAPTSRS
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgccggaagtggaaacggttgttcgagatctgcgcccgttactcgtcggg
cgcacgatcactgatgtccggcaaagtcggcacaaactccggcgcccgtggaaacctgcg
tggaacgcgaacgccatcgactcgggtgtcgaaagtgttcggcgccgcgggaaatggatt
ctaatagatctggcctcccaaccgtcttccccactactccgagttcacctcggaatgtcg
ggacaatttacggtcgtgcccgcggcactagcggaaccggatcacgtacacgtcgtgttc
gcactcgacggcgggaacgaactccggctccgtgacccacgtcggttcggggccgcggag
tattttcccgatcgtgcggcactcgaagccgagatgaacgcggacctcggtcccgaaccg
tttagactggacgcggattactttcgtagcgccgttcgcggaaccgcccgcaatctaaag
gccattctgctcgatcagaaaatcgtcgctggcgtgggaaacatctacgcggacgaggct
ctgttccgtgcgaaactgcacccggggcgaacgggtaagagtgtgaccaacgcggaatgc
gaccacctccgcgaagccatcgaagcggttcttctgcgggccatcgaatcgcgcggctcg
accattcgtgactacgtgggtgggtccggtctacgcggcgggtttcagaacgagttcgcg
gtgtacggtcgcacggacgaacaatgctcgacgtgcgaaaccgcgatcgtgtgcgcccgc
ttcgccggacgcgcgtcgcattactgtccgcagtgccaaagccaaggaagtgggaagaag
gcgaaaagcaaaaaggctccgcgtgcgccaacttcccggtcctga
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