Gemmata sp. SH-PL17: VT84_05375
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Entry
VT84_05375 CDS
T04358
Symbol
sigA_2
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VT84_05375 (sigA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ges03021
]
VT84_05375 (sigA_2)
Transcription machinery [BR:
ges03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VT84_05375 (sigA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
KORA
TcdB_N
DUF6819
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
AMV23822
LinkDB
All DBs
Position
1294213..1295046
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AA seq
277 aa
AA seq
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MSRLRRYRPDVVQSPLETYLREINETALLSADQEKSLARSIGEGDTEARDQMVRANLRLV
VNIARGYTGKGLALQDLIEEGNLGLLRAVEGFDPTMNTRFSTYASYWIKQSIKRALVNTA
KTIRIPAYMVELLAKWRRATNKLSDELGRPPTHEEVAKLLGLPKKKLNIIKKAIRVYNAA
PQADQGEAGWSIEEMLMDNRAKTPDTEMVETDDLKQVLVLLDKMDPREATVLRMRFGLND
EEPKTLKEIGECLGLTRERVRQIEGEALAKLGEDLCN
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgactccgccgctaccgcccggatgtggtccagtccccgctggaaacgtacctc
cgcgagatcaacgaaaccgcgttgctctcggccgaccaggagaagtccctggcccgctcg
atcggcgagggggacacggaggcccgcgaccagatggtgcgcgccaacctgcggctcgtg
gtcaacatcgcccgcgggtacaccgggaaggggctggccctccaggatctcatcgaagag
ggcaacctcggactgctgcgggcggtcgagggcttcgaccccacgatgaacacgcggttc
agcacctacgcgagctactggatcaagcaaagcatcaagcgcgctctggtgaacaccgcg
aagacgatccgcatcccggcgtacatggtcgaactgctcgcgaagtggcgccgggccacc
aacaagctcagcgacgaactcgggcgcccgccgacccacgaagaggtcgccaaactcctc
ggcctgccgaagaagaagctgaacatcatcaagaaggcgatccgcgtgtacaacgcggcc
ccgcaagccgaccagggcgaggccgggtggagcatcgaagagatgctcatggacaaccgc
gcgaagacgcccgacaccgaaatggtggaaaccgacgacctgaaacaagttctggtgcta
ctggacaagatggacccgcgcgaggcgacggttctgcgcatgcggttcggactgaacgac
gaggagccaaagaccctcaaggaaatcggcgagtgcctcggactgacccgcgagcgcgtg
cgccagatcgagggcgaggcgctcgcgaaactcggcgaagatctttgtaactga
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