Gemmata sp. SH-PL17: VT84_05480
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Entry
VT84_05480 CDS
T04358
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VT84_05480 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ges03019
]
VT84_05480 (groL)
03110 Chaperones and folding catalysts [BR:
ges03110
]
VT84_05480 (groL)
03029 Mitochondrial biogenesis [BR:
ges03029
]
VT84_05480 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ges04147
]
VT84_05480 (groL)
Enzymes [BR:
ges01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VT84_05480 (groL)
Messenger RNA biogenesis [BR:
ges03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VT84_05480 (groL)
Chaperones and folding catalysts [BR:
ges03110
]
Heat shock proteins
HSP60 / Chaperonin
VT84_05480 (groL)
Mitochondrial biogenesis [BR:
ges03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VT84_05480 (groL)
Exosome [BR:
ges04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VT84_05480 (groL)
Exosomal proteins of other body fluids (saliva and urine)
VT84_05480 (groL)
Exosomal proteins of breast cancer cells
VT84_05480 (groL)
Exosomal proteins of colorectal cancer cells
VT84_05480 (groL)
Exosomal proteins of bladder cancer cells
VT84_05480 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
AMV23843
LinkDB
All DBs
Position
1318454..1320139
Genome browser
AA seq
561 aa
AA seq
DB search
MAKQLLYTDDARKKLLAGAEKLARAVGSTLGPTGRNVIIDKSFGGPTVTKDGVTVSKEID
LADPFENMGAKLVNAVAQKTSDGAGDGTTTATVLALAIYQEGLRNITAGANPMAVKRGID
KAVAAAVKHLEDNLTRKLSKKEEMQQVAAISANNDPKIGSLMAEAFEKVGRDGVITVEEG
KTSETVLEFVEGMQFDKGYISPYFVVNTPELKWEHENVSVLLFEKKLSNVREMLPLLDAV
AKAGRPLLIIAEDVESEALAVLVVNRLRQLLEVCAVKAPGFGDRRKAMMEDIAVLTGGTF
VSEDLGIKLDSLEEVSPAEQQRGARPQPRVFALLGHATQVSVDKENCTIIVDPDEAREEA
IKARAQTIRTQMNQTESEYDKEKFSERLAKLLGGVAIVKVGASTEAEMKQTKGRIEDALH
ATRAAVSEGIVPGGGVALLRCVPVVEAAGEKLKGDERIGAEIVARALEKPIRTIAENGGV
DGAVVADEVTTRGEKDQNIGYDANTGKYVDMFKAGVLDPLRVTRSALTNAASIAALMLTT
EVMVTRIDEDDKKSKVAGAIA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcaactgctgtacaccgacgacgcgcggaagaagctcctggccggcgccgag
aagctggcccgcgcggtcggctcgacgctcgggccgaccggccgcaacgtcatcatcgat
aagtcgttcggcggcccgaccgtcaccaaggacggcgtgaccgtctcgaaggagatcgac
ctcgccgacccgttcgagaacatgggcgccaagctcgtgaacgcggtcgcccagaagacg
agcgacggggccggcgacggcaccaccaccgcgaccgtcctggcgctcgcgatctaccag
gaagggctgcggaacatcaccgccggcgccaacccgatggccgtgaagcgcggcatcgac
aaggccgtggccgccgcggtcaagcacctcgaagacaacctgacgcgcaagctctccaag
aaggaagagatgcagcaggtggccgcgatctcggccaacaacgacccgaagatcggctcg
ctgatggccgaggcgttcgagaaggtcgggcgcgacggggtcatcacggtcgaagagggc
aagacctccgaaaccgtgctggagttcgtcgaggggatgcagttcgacaagggctacatc
tcgccgtacttcgtggtgaacacgccggaactgaagtgggagcacgagaacgtctccgtg
ctgctgttcgagaagaagctctcgaacgtgcgcgagatgctgccgctgctcgacgcggtc
gcgaaggccggccgcccgctgctcatcatcgccgaagacgtcgagagcgaagcgctcgcg
gtcctcgtggtgaaccggctgcgccagttgctcgaagtgtgcgcggtgaaggcgcccggc
ttcggcgaccgccgcaaggccatgatggaagacatcgcggtcctcaccggcggcacgttc
gtcagcgaagacctcgggatcaagctcgacagcctcgaagaggtcagccccgccgagcaa
cagcgcggcgcccgcccgcaaccgcgcgtgttcgcgctgctcgggcacgcgacccaggtg
tcggtcgacaaggaaaactgcaccatcatcgtggacccggacgaggcccgcgaagaggcg
atcaaggcccgcgcccagacgatccgcacccagatgaaccagaccgagagcgagtacgac
aaggagaagttctccgagcgcctcgcgaagctcctcggcggcgtggcgatcgtcaaggtc
ggcgcctcgaccgaagccgaaatgaagcagaccaagggccgcatcgaggacgcgctgcac
gcgacccgggccgcggtgtccgaaggcatcgtcccgggcggcggcgtggccctgctccgg
tgcgtcccggtggtcgaggccgcgggcgagaagctcaagggcgacgagcgcatcggggcc
gagatcgtggcccgcgcgctggagaagccgatccgcaccatcgccgagaacggcggcgtg
gacggcgcggtggtggccgacgaggtgaccacccgcggcgagaaggaccagaacatcggg
tacgacgccaacaccggcaagtacgtcgacatgttcaaggccggcgtgctcgacccgctc
cgcgtcacccgcagcgcgctgaccaacgccgccagcatcgccgccctcatgctgacgacc
gaggtcatggtcacccgcatcgacgaggacgacaagaagtccaaagtcgccggggcgatc
gcctga
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