Gemmata sp. SH-PL17: VT84_05565
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Entry
VT84_05565 CDS
T04358
Symbol
rpfG_1
Name
(GenBank) Cyclic di-GMP phosphodiesterase response regulator RpfG
Organism
ges
Gemmata sp. SH-PL17
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD_5
HD
FHA
GAF_3
Yop-YscD_cpl
GAF_2
GAF
MU2_FHA
CodY
Motif
Other DBs
NCBI-ProteinID:
AMV23860
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Position
1336750..1338318
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AA seq
522 aa
AA seq
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MKRPLRLRGISGEIKGQVWESDSLLRAGRLGSLEIVLDDSSVSRRHAEVRRGDDGWFVRD
LESTNGTYVNGVRIGQGDQPLKARDIVQFGKVAVIVELVDATVDGPPSNQHVVAAAVSSF
DEGLRRIAFDRNHMPRAGEQMFALLRAGHHFVNTQSEDQLLDAVLNDAVSVLEAQRGAIV
LAESDAPEPKMRLRALAVGQGEPPGRFHYSKKLTQRCFASGVSLLYSTLTDAEESKLTQS
IADGAMASVLCVLLRTPRKRLGVLHLDRSFWQNPFTEDDLHLADALAAHVSAAIESAQLL
RRQKEQFLKTVTVLAQAVELRDDYTGNHTQRVTRYATMLGEKLELPDDQLELIKIGGPLH
DIGKIGIDDSILRKPGRLTGEEYECMKTHTTKGAEILSSIPEMGPIIPIVRSHHERWDGA
GYPDGLIAEEIPLLARIVAVADAFDAMTSNRPYHENKKGKPPSWAFAEVERQAGKQFDPM
CATAFLGIREEIVRAMAELLPGSELEDPEPVTVTGYVHDPRG
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgtcccctacgactccgcggcatcagcggcgaaatcaaagggcaggtctgggaa
tcggactcgctcttgcgcgccggccgcctcgggtcgctcgaaatcgtgctcgacgacagc
tccgtgagccggcgccacgcggaagtgcggcgcggcgacgacgggtggttcgtgcgcgac
ctggagagtacgaacgggacttacgttaacggcgtgcgcatcggccagggcgaccagccg
ttaaaagcccgcgacatcgttcagttcggtaaagtggcggtcatcgtcgaactggtggac
gcgacggtcgacggtccgccgtcgaaccagcacgtggtcgccgcggccgtgtcgagcttc
gacgaaggactgcgccggatcgcgttcgaccgcaaccacatgccccgcgccggcgagcag
atgttcgcgctcctccgggccgggcaccacttcgtcaacacgcagagcgaggaccagctc
ctcgacgcggtcctcaacgacgcggtcagcgtactcgaagcccagcgcggcgcgatcgtg
ctggccgagagcgacgcccccgaacccaagatgcgcctgcgggcgctggcggtcggccag
ggcgaaccgccggggcggttccactactcgaagaagctcacccagcgctgcttcgcgagc
ggcgtctcgctgctctacagcaccctcaccgacgccgaggaatcgaagctcacccagagc
atcgcggacggcgcgatggccagtgtgctgtgcgtgctgctccgcaccccgcgcaagcgc
ctgggcgtgctgcacctcgaccggagcttctggcagaacccgttcaccgaagacgacctg
cacctcgccgacgcactggcggcgcacgtgtccgcggcgatcgagagcgcgcaacttttg
cgccggcaaaaggaacagttcctcaagacggtcacggtgctcgcccaggcggtcgaactc
cgggacgactacacgggcaaccacacgcagcgcgtgacgcgctacgcgaccatgctcggc
gaaaaactcgaactgcccgacgaccagctcgaactcatcaagatcggcggcccgctccac
gacatcggcaagatcgggatcgacgactcgatcttgcgcaaaccggggcggctcacgggc
gaagagtacgagtgcatgaagacgcacacgacgaagggggccgagatcctttcgtcgatc
ccggaaatgggaccgatcatcccgatcgtgcggagccaccacgagcgctgggacggcgcc
gggtacccggacggcctcatcgcggaagagatcccgctgctggcgcgcatcgtggcggtc
gcggacgcattcgacgcgatgacctcgaaccggccgtaccacgagaacaagaagggcaag
ccgccgtcgtgggcgttcgccgaagtggagcgccaggccggtaagcagtttgacccgatg
tgtgccacggcgttcctgggcatccgcgaagagatcgtgcgggcgatggccgaactgctc
cccgggagcgaactcgaagacccggagccggtcaccgtaaccgggtacgttcacgacccg
cgcggctga
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