Gemmata sp. SH-PL17: VT84_06530
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Entry
VT84_06530 CDS
T04358
Symbol
wapA_1
Name
(GenBank) tRNA nuclease WapA precursor
Organism
ges
Gemmata sp. SH-PL17
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
He_PIG
DUF642
DUF4114
Big_9
Cadherin_5
DUF6531
RibLong
CarboxypepD_reg
Ig_SIBA-E_2nd
SdrD_B
Ig_DAG1
Big_7
Motif
Other DBs
NCBI-ProteinID:
AMV24033
LinkDB
All DBs
Position
1522010..1530193
Genome browser
AA seq
2727 aa
AA seq
DB search
MFNGRAVVIPGTAGATTDVRFIRYRQHTLYTNSEAGLFAVDDATGTIGGLAPGAPGYTRA
ALDASRRVPLYGSGSPSEVSARLVAGRHYGLYLVRGGSADAARATEPADAVRDGGPVAWF
SFPGANSDGFDHLRVLARNRFAFEDLPGGGDEDFNDLLVEIRPPVTNGGSNPSPVLTNAP
PTISAVAAQHTTTGAATGPIAFRVDDHETPPARLRVRASSSNPALVPDDGIVFGGSGADR
TVALAPVAGVTGTARVTLWVTDEGGLTASTEFELSVTPPDAAPAFRSVPAGTAAVGRLYA
YAARAEGFSALKYALVSGPTGAQFDPVAGYLGWLPTAADIGTQQVVLEATDDQGRTARQS
FTVAVSATGEVRGTVTAGAPLPSALAVYLDANANGRRDAGERAVPVDANGNYVLTGLEAG
SYAVAVDLPVGWEITDPPAGLRTVAVTGGAVTNGVNFTIRAHSGNHDPVITSTPPTLVPG
TVYTYPVEATDPDGDPLSYSLVEGPAGMAVDPVTGVLTWPAPSEATTFQGRAAWEASAGG
AAATTALHFDGPTATNERAVNDPRIDPSYLSQGVRFLPFTGTNVYPYILRNQQHQIPDPA
RDGLLANNSSPNPVSDLLGRAIRFEFTVPTYAVGVVTNRHPFDNPTGDGGYMRVYDAGGS
LLAQVDVEPGVFAGVSTSVPIGRVEVVNTFGSDIKFGISELALGTKAPAYPVRVRVGDGR
NGATEQAFVVAPTASPNLIVNGGFETGPDPLPTDLGYRIYGAGSTAIPGWTVTRDTIDYE
GTHWTELDGTRSIDLAGTPGAGAIAQTIPTVPGQTYRVAFDLGGNMYGGPAVKEMRVSAA
GQSADFRFDVTNSTTAVMNWRRVEWTFVADGPTATLEFASLGPAGGSFGAVIDEVAVYAP
AAPAAGPRFTSQPLTGATVGHPYRYAPTVAAPAGPVRFDLVGAPAGMSVDPATGALFWEP
APDQAGPSDVVLRVWDAVERSTTQAFRIVVHTAADNRAPRITSTAPDVARVAAEYRYAVA
ASDPDGDALVFALTEAPAGMTIDPTTGAVTWTPRADQVGSARVTVTATDPSLATATQTFT
VTVPDPAARPVVTITSPTNGALVGLPVEVTGTVASPGGQVDFYKVFYARADRVDPSQPEW
DAVAGRLTDPDYVLIGEGRGPIANGRLAAFDPTVLTDDEYVLVVAAFDLNGQGWVEPVRV
SVTGGPKIGAFTLAVTDLEIPLAGIPITVTRVYDSREAGEEGDFGFGWRLGIADARIRET
VPQTGDGFFATGAAFRVGTRVYLTNAEGKREGFTFQPVPTPAFFTAAFKPVFVPDPGVTD
TLTVDDLTLIQKADGTFAAYLVGFPYNPDTYRLTSKDGRTYTYDQAGGLRTVTDRTGTTL
TFTRDGITSSTGVAVRFLRDTWGRITEVIDPDGKSIRYGYNGAGDLVTVTDRTNQVTTNV
YRTDRPHYLGEVYDPLQHRAVKTEFDPSGRLVATTDALGNRSVQAYDPDHFTETVADALG
NVTTLVYDTRGNVVRETDPLGRTTLREYDAADNEITTTDPLGHVTRRTFDARRNVLSETD
ARGGTTRYTFNTFDKVTSATDALGRVTTYRYDAKGNPLGTVDALGYATARTNDDQGRPVT
ETDANGNVTSYAYTDESVAGPTRVTHADGTFRTIAYSALGLPALITDERGAKLKLAYDAS
GRLLSVLAPDTGLTEYRYTGDLLTSQIDPLGGVTLYAYDAANQLVAKTDAIKGVTRYGYD
KAGRLVTTTDPMNHTTTTAYRADGQVESVTDAAGGITRYEYDAAGNRTAEIDALDRRRNY
IYDELNRLVRKDDCPCPDEIYAYDAVGNLVSRTDKNGHITRYEFDELNRLVTETDALNGV
TRYQYDANGNQTAVTDANGHATQSTYDSRNRLTRRTDPAGFSVTFGYDGAGNQVSTTDQL
GFITRFDYDGLGRLVRTENPEHGVTSNKYDLAGDLVSTTDPLGRETHYTFDLLRRLVKVT
DAASGIVTYEYDSAGNRTALTDPVGNRTTFGFDELNRQVRETDPLGHSINTRFDAVGNRI
EVVDRDGRKRTFIYDELDRLTDETWWDGATAIRTIHSDYDAVGNLMRISDPDSTYQFSYD
ALDRQITVDNAGTPNLPHLILTNRYDAVGNRIEVRDNTGVTVDSTYDARDLLTSRRWSGG
GVSDARIDFGYDARTERTSVARYSDLAGSQLVSHSSLSYDKLGRVSEIDHFGANGTAVSA
YGYSYDAASQLARELRNGTVIDYRYDAIGQLLGADRATGPDESYSYDAAGNRTGSGYQTG
PANRLLSDGTFNYSYDFEGNLVRKTEITTGAFTEYTYDYRNRLVGVTERDTVGSITTEVH
YTYDALDRRIATTVNGVSTLTVHDGNATWADYNTIGDVSAHYLLGDRIDEMLARFRPREE
TVWYLTDKIGTVRELFSDTGAVLGRIDYGSFGDIISQTSTTYGDRFTFTGRELDNETGSY
YYRARFYNPTNGRFNTEDSIRLLGNSINFYQYTGNHPINSTDPSGNTEAIEYSLTTNLVI
GAAVGGLFGILVGAGHKAIDKPADEWTKDDYIDIATSGILGAFLGATFGVASAAAAAGST
LAQATIAFLEGLATASFGYGIYTTTVNYQDDPNRLVEHLILDIAVAGFTILSVRWSKTSI
LRDLIQDESGSAPRPRGDLPARGTPNSTAAKDDGKGNRQTREYGPDGRATKDIDFGHDHG
AGDPHAHDWDWTQMKPRQPGRPLKPGE
NT seq
8184 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaacgggcgcgcggtcgtgatcccggggactgccggtgctaccaccgacgttcga
ttcatccgctaccgacagcacacgctgtacacgaacagcgaggccgggttgttcgcggtc
gacgacgccacgggcacgatcggcgggctcgcgccgggcgccccgggctatacgcgggcg
gcactggacgcgagccgccgggttccgctttatggctccggttcgccctccgaggtgagc
gcgcgtctcgtcgccgggcgccattacgggctctacctggtccggggcgggtccgccgat
gcggcccgcgcgaccgaaccggcggacgcggtgcgcgacggcggccccgtggcctggttc
tcgttccccggggccaattcggacgggttcgatcacctgcgcgtgctcgcgcgcaaccgg
ttcgcgttcgaggacctgcccggcgggggcgacgaggactttaacgacctgctggtcgag
atccggccccccgttaccaacggcggatcgaacccgtcgcccgtcctgaccaacgccccg
ccgaccatttcggccgttgcggcccagcacacaaccacgggcgccgcgaccgggccgatc
gcgttccgggtcgacgaccacgaaacgccgcccgcgcgcttgcgggtccgcgcctcgtcg
tcgaacccggcactggtgcccgatgacggcattgtgttcggcgggtccggtgccgaccgc
acggtggctctcgcgccggtggccggggtgacgggcaccgcgcgggtgacgctgtgggtg
acggacgagggcgggctcaccgcgtccaccgagttcgagttgagcgtcaccccgcccgat
gcggcgcccgcgttccgtagcgtgccggccggcaccgccgccgtgggtcgcctgtacgcg
tacgcggcccgggccgagggcttcagcgccctgaaatacgccctcgtttccggaccaacc
ggcgcgcaattcgatccggtcgccgggtacctggggtggctcccgaccgcggccgacatt
ggtacccaacaagtggtcttggaggccaccgacgatcagggccgcacggcccgccagagc
ttcacggtcgcggtttctgcgaccggggaggtgaggggaacggtgaccgctggcgcaccg
ctcccgtcggcgctcgcggtgtacctggacgccaacgcgaacgggcggcgcgacgcgggc
gagcgtgcggtcccggtggacgcgaacgggaattacgtgctcaccgggttggaagccggg
tcctacgcggtcgccgtcgatctccccgtcgggtgggaaatcaccgatccgcccgcgggt
cttcggacggtcgcggtcaccggcggggcggtcacgaacggtgtgaactttacgatccgg
gcgcactccggcaatcacgatccggtcatcaccagtacacctcccactctggtcccgggt
accgtctacacgtacccggtcgaggcgaccgacccggacggcgacccgctgagctattcg
ctcgttgaggggccggccgggatggcggttgatcccgtcaccggggttctcacctggccc
gcgccgagcgaggcgaccacgttccaggggcgagcggcctgggaagcgtccgcgggcggg
gccgcggcgacgaccgcgctccatttcgacggtccgaccgcgaccaacgaacgggccgtg
aacgatccccgcatcgacccgtcctatttgagccagggcgtccggttcctgccgtttacc
ggcaccaacgtgtacccgtatattcttcggaaccagcagcaccagatccccgacccggcg
cgcgacgggttgctggccaacaactcgtccccgaacccggtctcggacctgctcgggcgc
gcgatccggttcgagttcaccgtgcccacttacgcggtcggggtggtgaccaaccggcac
ccgttcgacaaccccactggcgacggcgggtacatgcgcgtgtacgacgcgggcggcagc
ctgctcgcgcaggtggacgtggaaccgggcgtgttcgcgggcgtgagcacgtcggtgccg
atcggccgggtcgaggtcgttaacacgttcggctctgacattaagttcgggatctcggaa
ctggcgctgggcaccaaagctccggcgtatccggtgcgcgtgcgggtcggggacgggcgc
aacggggcaaccgaacaggcgttcgtcgtggccccgaccgcgagtcccaacttgatcgtc
aacggggggttcgagaccggcccggacccgctccccacggacctcgggtaccggatctac
ggggccgggagcaccgcgatcccggggtggaccgtcacccgcgacacgatcgactacgag
ggcacccactggacggaactcgacgggacccggagcatcgacctggcgggcacccccggg
gccggggccatcgcccagacgatcccgaccgtgcccgggcaaacgtaccgggtcgcgttc
gacctgggcgggaacatgtacggcggcccggccgtcaaggagatgcgggtttcggccgcg
ggccagtcggccgatttccggttcgacgtcaccaactcgaccacggcggtgatgaactgg
cgccgggtcgagtggacgttcgtcgccgacgggccgaccgcgaccctcgagttcgccagc
ctggggccggcgggcgggtcgttcggggcggtcatcgacgaggtcgcggtgtacgcgccc
gccgccccggccgcgggtccgcggttcacgtcacaacctctgaccggcgcaacggtcggc
cacccctaccggtacgccccgacggtcgccgcgcccgccggcccggtccggttcgacctc
gtcggcgccccggcgggcatgtcggtggacccggcaaccggcgccctattttgggagcct
gctcccgaccaggccgggccgagtgacgtcgtgctccgggtatgggacgcggtcgagcgt
tccacgacccaagcgttccggatcgtggtccacaccgcggccgacaaccgcgcgccgcgg
atcacctcgacggcaccggacgtcgcgcgggtcgcggccgagtaccggtacgcggttgcg
gcgagcgacccggacggtgacgcgctggtcttcgcgctcaccgaagcccccgccgggatg
acgatcgatccgaccaccggggccgttacctggacgccccgggccgatcaggtcggttcg
gcccgcgtcaccgtcaccgcgaccgatccgtcccttgcaaccgcgacccaaacgtttacc
gtcacggttcccgacccggccgcgcggccggtggtgaccatcacctcgccgaccaacggg
gcgctcgtcgggttaccggtcgaggtgaccggcacggtcgccagtcccggcgggcaggta
gacttctacaaggtgttttacgctcgcgccgaccgcgtcgacccgtcccaacccgaatgg
gacgcggttgccggtcggctcacggacccggactacgtgctcatcggcgaggggcggggg
ccgatcgccaacgggcgcctggcggcgttcgatccgaccgttcttaccgacgacgagtac
gtgctcgtggtggccgcgttcgacctgaacggccagggttgggtcgagccggtccgggtg
agcgtcaccggcgggccgaaaatcggcgcgttcaccctcgcggtcaccgacctcgagatc
ccgctggccgggatcccgatcaccgtgacccgcgtgtacgactcgcgcgaggcgggcgag
gagggggacttcgggttcgggtggcgcctggggatcgccgacgcgcggatccgtgagacc
gtgccccagaccggggacgggttcttcgccaccggggccgcgttccgggtcggaacccgc
gtgtacctcaccaatgccgagggcaaacgcgagggattcacgttccaaccggtgcccacg
cccgcgttcttcacggcggctttcaagccggtcttcgtcccggacccgggcgtcactgac
acgctcacggtggacgacctcacgctgatccagaaggccgacgggacgttcgcggcgtac
ctggttgggttcccgtacaacccggacacgtaccggctgacctccaaggacggccgcacc
tacacctacgaccaggcgggcgggctgcgcacggtcaccgaccgcaccggcaccacgctc
acgttcacgcgcgacgggatcaccagttcgaccggcgtggccgtgcggttcctgcgcgat
acttggggccggatcaccgaagtaatcgatcccgacggcaagtcgatccgctacgggtac
aacggcgccggagacctggtcaccgttacggaccggacgaaccaggtcacgacgaacgtg
taccgcacggaccggccccactatttgggcgaggtatacgacccgctccagcaccgggcg
gtgaagaccgagttcgacccgtcaggccggttggtggcgaccaccgacgcgctgggcaac
cgctcggtacaagcctacgacccggaccactttacggagacggtggccgacgcgctgggg
aacgtgaccaccctggtctacgatacgcgcggtaacgtggtgcgagagaccgacccgctg
ggccgcacgacgctgcgcgagtacgacgcggccgacaacgagatcacgaccacggacccg
ctcgggcacgtgacgcgccggacgttcgacgcgcggcgcaacgtgctgagcgaaacggac
gcgcgcgggggcaccacgcggtacacgttcaacacgttcgacaaggtcaccagcgccacc
gacgcgctcggccgggtgacgacctaccggtacgacgcgaagggcaacccgctgggcacg
gtcgacgcgctcggctacgcgaccgcacggaccaacgacgaccagggccggcccgtcacc
gaaaccgacgccaacgggaacgtcacgagctacgcgtacaccgacgagtcggtcgccggc
cccacccgggtgacgcacgcggacgggacgttccgcaccatcgcatacagcgcgctggga
ctgccggcgctcatcaccgacgagcgcggcgccaagttgaaactggcgtatgacgcgagc
ggccggttgctcagcgttctcgcacccgataccgggctcaccgagtaccgctacacgggc
gacctgctcaccagccagatcgacccgctcggaggtgtcacgctgtatgcgtacgatgcc
gcaaaccaactcgttgccaaaacggacgcaatcaagggcgtgacgcgctacggatacgac
aaggcgggccggttggttacgacgaccgatccgatgaaccacacgacgaccacggcctac
cgggccgacggtcaggtggagagcgtaaccgatgcggcgggcgggataacgaggtatgag
tacgatgcggccggcaaccgcacggccgagatcgacgcgctcgaccggcgccggaactat
atttacgacgaattaaatcgtctcgtccgcaaggacgattgcccgtgtcccgatgagatt
tatgcctacgatgccgtcggcaacctggtgagccggaccgacaagaacggccacatcacg
cggtacgagttcgatgagctgaaccgactcgtcaccgagaccgacgcgctaaacggggtg
acacgctatcagtacgatgcgaacgggaaccaaacggctgtcaccgacgctaacggccat
gccacacaaagcacgtacgactcccgcaaccggctgacccggcgaaccgacccggccggg
ttcagcgtcacgttcggctatgacggggccgggaatcaggtttctacaacggaccaactc
ggctttatcacccggttcgactatgacggcttgggccgattggtgcggaccgagaacccg
gaacacggagtcacgtcgaacaaatatgacctcgcaggtgatttggtctcgaccaccgac
ccgctgggtcgcgagacgcactacacgttcgaccttctgcggcgcctcgtcaaggtcacc
gacgcagcaagcgggatcgtgacatacgagtacgacagcgcagggaaccgaacggcgctg
accgatccggtcgggaaccgcaccacgttcggcttcgacgagttgaaccgtcaggtgcgc
gagaccgacccgctggggcattcgatcaacacgcgcttcgacgcagttgggaaccgcatt
gaggtggttgaccgcgatgggcgcaagcggacgttcatctacgacgaactcgatcgatta
accgacgaaacctggtgggacggtgcaaccgccatccgcacgatccactcggactacgac
gcggtcggcaacctgatgcggatcagcgaccctgacagcacgtaccagttctcctacgac
gccctcgatcgacaaatcacggtggacaatgcgggcaccccgaacctgccgcacctcatc
ctgacgaaccgttatgatgcggtcgggaaccgcatcgaggtgcgggacaacacgggcgtg
acggtcgactccacgtatgacgcccgcgatctgctcacttcgcgtcgctggtccggcggc
ggggtctcagacgcgagaattgatttcgggtacgacgcacggaccgagcgcacgagtgtg
gcccgttacagcgacctcgcgggttcgcaactcgtgagtcacagtagcctgagctacgac
aaactcggccgtgtcagcgagattgaccatttcggtgcaaacggaaccgcggtttctgct
tacggctacagttacgacgccgcgagccaacttgcccgcgaactgcggaacggtacggtc
atcgattaccgctacgatgcgatcggccaactcttaggcgcggaccgcgccaccggaccg
gacgaatcttacagctacgatgctgccggcaaccgcacgggcagtggctaccaaaccggc
ccggcaaatcgtctgctgagcgacggcacgttcaattacagctacgatttcgagggcaat
ctcgtccgcaagacggagatcaccacgggcgcattcactgaatacacctacgactaccgc
aatcgtctggttggcgtgacggaacgagatacggttgggagcatcactaccgaggtacat
tacacctacgatgccctcgaccgccgcattgccacaaccgtgaatggggtgagcaccctc
actgttcacgatggcaacgctacttgggccgattacaacacaattggagatgttagcgcc
cactacctactgggcgaccgaattgatgaaatgttggcccgcttcaggccacgtgaagag
accgtgtggtacctcaccgacaaaattggcaccgtccgtgagctattcagcgataccggc
gcagtgctaggtcgaatcgactatggtagttttggtgatattattagccaaactagcacg
acctatggtgaccgtttcacgttcactgggcgagagttagataatgaaacaggctcttat
tactatcgggcacgcttttacaacccaacaaatggccggtttaacaccgaagattcaatc
aggttgctaggaaattcaattaatttttatcaatacactggcaatcacccgataaacagt
accgacccaagcggaaacactgaggcgattgagtattcattaacaactaatctcgttatc
ggcgcggccgttggaggattgtttgggatacttgtgggtgccggccacaaagcaattgac
aaaccagcagacgaatggactaaagacgattacattgacattgcaaccagtggaattctt
ggcgcctttcttggcgcaacatttggagtcgcctctgctgccgctgccgccggcagcacc
ctcgcgcaagcaacaatagcctttttagaaggattggcgacggcttcgtttggatatgga
atctacaccacaaccgttaattatcaagatgacccaaatcgtctcgtagagcatttaatt
cttgacattgcagtagctggatttacgatactatcagttagatggtcaaaaactagtata
ctccgtgatcttatccaagatgagagcggatcagcacctaggccacgaggagatctgcct
gcgcgaggcacaccaaacagtacagctgcaaaggatgatggcaagggtaatagacagaca
cgagaatatgggccggatggtcgcgcaacaaaagacattgattttggccacgatcacggt
gctggtgatccacacgcacacgattgggattggactcagatgaaacctcgtcaacctggc
cgccctcttaaaccaggagaatga
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