Gemmata sp. SH-PL17: VT84_08725
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Entry
VT84_08725 CDS
T04358
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ges
Gemmata sp. SH-PL17
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VT84_08725 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ges03019
]
VT84_08725 (rnc)
03009 Ribosome biogenesis [BR:
ges03009
]
VT84_08725 (rnc)
03036 Chromosome and associated proteins [BR:
ges03036
]
VT84_08725 (rnc)
Enzymes [BR:
ges01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
VT84_08725 (rnc)
Messenger RNA biogenesis [BR:
ges03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VT84_08725 (rnc)
Ribosome biogenesis [BR:
ges03009
]
Eukaryotic type
90S particles
RNase
VT84_08725 (rnc)
Prokaryotic type
rRNA processing factors
VT84_08725 (rnc)
Chromosome and associated proteins [BR:
ges03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
VT84_08725 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AMV24467
LinkDB
All DBs
Position
complement(2051283..2052017)
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AA seq
244 aa
AA seq
DB search
MPPSDTLTNNRERTVLENCQEAIGYRFLKPELLRSALTHTSSANTRAASNERLEFLGDSV
LGLVTCEQLYQRFPEYQEGDLTKVKSAVVSRKTCARFSQEIGLGDFLFLGRGVHTHGEMP
LNILANVFESLVAAIFLDGGWGAAREFILRFITPEIERVARDAISSNAKSQLQTVTQREY
GDTPRYFLLDEQGPDNNKCFKVAAQVHDERFPPAWGSTKKEAELKAAMNALAHIHGEPLP
FPPA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttcggacacactcactaataaccgggaacgcacggtcctcgaaaattgccag
gaagcgatcgggtaccggtttttgaagccggaactgctccggtcggccctcacgcacacg
tccagtgcgaacacgcgggcggcgtccaacgagcgactggagttcctcggcgacagcgtg
ctggggttggtcacctgcgagcaactctaccagcggttccccgaataccaggaaggcgac
ctcacgaaagtgaagtccgccgtcgtcagccgtaaaacctgtgcgcggttcagccaggaa
atcggcctcggcgacttcctgttcctcggccggggggtccacacccacggcgagatgccg
ctgaacattctcgccaacgtcttcgagtcgctcgtcgcggccatcttcctcgatggcggc
tggggcgcggcccgcgagttcatcctgcggttcatcacgcccgagatcgagcgcgtggcc
cgggacgccatctcctcgaacgccaagtcgcagttgcaaaccgtgacgcagcgcgagtac
ggcgacaccccgcggtatttcctcctcgacgagcaggggccggataacaacaagtgcttc
aaggtcgcggcgcaggtccacgacgagcggttccccccagcttgggggagcaccaagaag
gaagccgaactcaaggccgcgatgaacgcgctggctcacattcacggcgaaccgctcccg
ttcccgccggcctga
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