Gemmata sp. SH-PL17: VT84_09845
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Entry
VT84_09845 CDS
T04358
Symbol
truD_2
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ges
Gemmata sp. SH-PL17
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ges03016
]
VT84_09845 (truD_2)
Enzymes [BR:
ges01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
VT84_09845 (truD_2)
Transfer RNA biogenesis [BR:
ges03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VT84_09845 (truD_2)
Prokaryotic type
VT84_09845 (truD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AMV24686
UniProt:
A0A142XCL4
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All DBs
Position
2255590..2256765
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AA seq
391 aa
AA seq
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MKLKQQPEDFRVEELTDTVPDAGDFALYRLDKTGWTTPDALAAIRRRWQLDFRRLSYGGL
KDRHAVTSQHVTVFRGAKRNLSHERVTLTYLGQCAEPFTAANIRANRFTIALRSLSDGAI
THAEDALREVAGAGVPNYFDDQRFGSVGEAEEFVAKEMVFGRFERALWLALAAPYEFDRA
DAKREKATLIELWGKWPECQAKLPKGHARSLVSYLAAHPTDFKGAVARLRPELQGLYLSA
YQSYLWNKMLAAWLTATLGAENLTTVELKLGRVPAPVRVSEEHRAAWESLTLPLPSARVK
PAPDAVWLPIVEEALKSEGLTLAELKVKGMQKPFFSKGDRSACVRPENLSHTAEADELNR
GRKKLVLRFDLPRGSYATMLVKRVTSPSPTP
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaagcagcagccggaggacttccgggtcgaggaactgaccgacaccgtgccc
gacgcgggcgatttcgcgctgtaccggctcgacaagaccggttggaccacgccggacgcg
ctcgcggcgatccgccggcgctggcaactcgacttccgccggctgagttacggcgggcta
aaggatcgccacgcggtgacctcacagcacgtcaccgtgttccgcggggcgaagcggaac
ctgtcccacgagcgcgtgacgctcacgtacctcggtcagtgcgcggagccgtttaccgcg
gccaacatccgtgcgaaccgcttcacgatcgcgctccgctccctgagcgacggcgccatc
acccacgccgaagacgcgctccgcgaggtcgccggcgcgggagtgccgaactacttcgac
gatcagcgcttcggctcggtcggggaggcagaagagttcgtcgcgaaggagatggtgttc
gggcggttcgagcgggcactgtggctcgcgctcgcggcgccctacgagttcgaccgggcc
gatgcgaagcgcgagaaggccacactcatcgagttgtggggcaagtggcccgagtgccag
gcgaaactgccgaagggccacgcccgcagcctggtcagttacctcgccgcgcacccgacc
gacttcaagggcgcggtcgcgcggctgcggccggaacttcagggcctgtatctgtctgcg
taccagagctacctctggaacaagatgctggccgcgtggctcaccgcgacgctcggcgcg
gagaatttgaccacagtggaactgaagctcgggcgcgttcccgcgccggtgcgcgtgtcg
gaggaacaccgtgctgcgtgggaatcactcacactcccgctcccctccgcgcgcgtgaag
cctgctcccgatgccgtgtggctgccgatcgttgaagaggcgctgaagtcggagggccta
acgctcgcggaactgaaagtgaaggggatgcagaagccgttcttctcgaagggcgaccgc
tccgcgtgcgtgcgccccgagaacctgagccacaccgcggaggccgacgagctgaaccgc
gggcgcaagaaactggtgctccgcttcgacctcccgcgcggcagctacgcgacgatgctg
gtaaaacgcgttacttccccttcaccaactccttga
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