Gemmata sp. SH-PL17: VT84_10520
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Entry
VT84_10520 CDS
T04358
Symbol
rbn
Name
(GenBank) Ribonuclease BN
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ges
Gemmata sp. SH-PL17
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ges03016
]
VT84_10520 (rbn)
Enzymes [BR:
ges01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
VT84_10520 (rbn)
Transfer RNA biogenesis [BR:
ges03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
VT84_10520 (rbn)
Prokaryotic type
VT84_10520 (rbn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AMV24821
UniProt:
A0A142XD22
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All DBs
Position
2438940..2439947
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AA seq
335 aa
AA seq
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MPLTFQVLGQPEQDNALFVKVDTGQSQTRLLFDCGDGCPHQLGPTDLREVDHLCFSHLHM
DHIAGFDLFFRLNFDRITKENRIWVPHGSAEVIQHRFRGFMWNLVDEKQEGEWFVSEIGP
DVVREARFLAKEGFRTAHTAPERPRQGRTVIEGEGFTVEAMLLDHGTPSVGYLVREMDRV
NVDTTKLAAKGLKPGPWVKRLRGPSAAPGETVEIDGVSHSLVALQTELLVTTPGDSIAYL
TDFRMTPATADALVSWLRGVNTVVCESQYRAADSDLAEPVMHSTTEEVALMASRAGIGRL
ILFHFSGRYDAIARREMLAEARAVFANTTFPDGWA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcacgttccaagttctcggccaacccgaacaagacaacgcactgttcgtgaaa
gtggacacggggcagtcgcaaacgcggctcctgttcgattgcggcgacgggtgcccgcac
caactcggccccaccgacttgcgcgaagtcgaccacctgtgtttctcgcacctgcacatg
gaccacatcgcgggcttcgatctgttcttccggctgaactttgaccgtatcacgaaggag
aatcggatctgggtgccgcacggcagcgccgaggtgattcagcaccggttccgcgggttc
atgtggaacctcgtggacgagaagcaggagggcgagtggttcgtttccgagatcgggccg
gacgtggtgcgcgaggcccggtttctcgccaaagagggcttccggaccgctcacacggcg
cccgaacgcccgcgccaggggcgcaccgtgattgagggcgaaggtttcacggtcgaagcc
atgttgctcgatcacggcaccccctcggtggggtacttggtgcgcgagatggatcgcgtg
aacgtggatacgacgaagttggccgcgaagggattgaaacccggaccgtgggtaaaacgc
ctccgcggtccgagtgccgcaccgggggaaaccgtcgaaattgacggcgtttctcattcg
ctcgtcgcgctgcaaaccgaactgctcgtcaccactccgggcgattcgattgcgtacctg
accgacttccgcatgacccccgcgaccgcggacgcgctcgtgtcgtggttacgcggggtg
aacacggtggtgtgcgagagccagtatcgagccgccgattcggatctcgccgaaccagtc
atgcactccaccacagaggaagtcgcacttatggcgtcgcgtgccggcatcggtcggttg
atcctgttccacttctcgggtcggtacgacgcgatcgcgcgccgggagatgctcgccgaa
gcccgcgcggttttcgcgaacacgacgtttccagacgggtgggcgtag
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