Gemmata sp. SH-PL17: VT84_10540
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Entry
VT84_10540 CDS
T04358
Symbol
rbsB
Name
(GenBank) D-ribose-binding periplasmic protein precursor
KO
K10439
ribose transport system substrate-binding protein
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges02010
ABC transporters
ges02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VT84_10540 (rbsB)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
VT84_10540 (rbsB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ges02000
]
VT84_10540 (rbsB)
Transporters [BR:
ges02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
VT84_10540 (rbsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AMV24825
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Position
2441795..2442841
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AA seq
348 aa
AA seq
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MPRLLYYLFAAALPVLFGCQKPEEQFTVVVIPKGLTHEHWQSVRRGAERCADDLRAEDGT
TVRIIFDGPLRERDAIEQIRIVDRRVATGASGIVLAPQHSRTMTACVKRAADAGVPVVII
DSGLDDPDHFVKYVATDNYNGGCLAARHLIGELKKQGKDKPKLILFRYAVGSQATEDRER
GFEETVKKICPDAVWLSTDKYAGATRDSAMREAGPLVLQYGNQVDGIFAPNESSASGTAD
VLRSQGLNKKVLLMGFDASKPLLQSIQEGDVIGSILQDPYRMGYLSTWYCVQNLRGRDVS
NGRKDMSESTGEYLVTKENLNSAFTLGLYDPETQAKRTTEELRKGPKR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtctgctttattacctgttcgccgccgcgctgccggtcctgttcgggtgccag
aaacccgaggaacagttcaccgtcgtcgtcataccgaaggggctgacgcacgagcactgg
cagtcggtgcgccgcggggccgagcgctgcgcggacgatctgagggccgaagacggcacc
acggtacgaatcattttcgacggcccactgcgcgagcgcgacgcgatcgagcagattcgg
atcgtcgaccggcgcgtggcgaccggggcgagcggtatcgtgctcgccccacagcacagc
cgcactatgaccgcctgtgtgaaacgcgcggccgacgcgggcgtgcccgttgtcattatc
gactccggactcgatgatcccgatcacttcgtcaagtacgtcgcgaccgacaactacaac
ggcgggtgcctcgccgcccgtcacctcatcggggaactcaaaaagcaggggaaagacaag
ccaaaactgatcctgttccgttacgcggtcggttcgcaggcgacggaagaccgtgagcgg
ggctttgaagagacggtgaagaaaatctgcccggacgcggtctggctctcgaccgacaag
tacgccggggcgacgcgcgattccgcgatgcgcgaagcggggccgctcgtccttcagtac
ggcaatcaggtggacgggatcttcgcaccgaacgaatcgtccgcgtccggcacggccgac
gtgttgcgctcccaggggttgaacaagaaagtgctcctaatggggttcgacgcgagcaaa
ccgctgctgcagtccatccaggaaggcgacgtgatcggcagcattttgcaagacccgtac
cgcatgggttacctatcgacgtggtactgcgtacagaacctgcgtgggcgcgatgtgagc
aacgggcggaaggacatgagcgagagcaccggtgagtacctcgtcacgaaggagaatctc
aattcggcgttcacgctcgggctgtacgaccccgaaacgcaggccaagcgcaccaccgaa
gaactgcggaaggggccgaaacgatga
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